RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 HES4Q9HCC6 221 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 SMURF1Q9HCE7 757 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 WIPI2Q9Y4P8 454 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 PPIAL4AQ9Y536 164 aa13.81□□□□□ -0.2
SPTLC2-203ENST00000554901 OOEPA6NGQ2 149 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SLC17A2O00624 439 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SLC22A1O15245 554 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 AKR7A2O43488 359 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SPRY1O43609 319 aaPredicted RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 PLATP00750 562 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 IL1AP01583 271 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 IGHV2-70P01814 119 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 CPT2P23786 658 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 MDH2P40926 338 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 OR3A4PP47883 348 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 CAPZA1P52907 286 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 MICBQ29980 383 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SMIM21Q3B7S5 101 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 TMEM155Q4W5P6 130 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 RNF144BQ7Z419 303 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 LRRC28Q86X40 367 aaPredicted RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 KRTAP1-3Q8IUG1 177 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 CROCCP3Q8IVE0 287 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 TBC1D15Q8TC07 691 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SLAMF9Q96A28 289 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 GFI1Q99684 422 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 MRPS28Q9Y2Q9 187 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 IGKV1-12A0A0C4DH73 117 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NOTOA8MTQ0 251 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NDUFA2O43678 99 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 ANGPTL7O43827 346 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NOL3O60936 208 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NXPH2O95156 264 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 IGKV1D-12P01611 117 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 HTR2CP28335 458 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NR4A2P43354 598 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 LSM3P62310 102 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 AWAT2Q6E213 333 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 FAM166AQ6J272 317 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 OR4D6Q8NGJ1 314 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 BPESC1Q9GZL8 116 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 METTL9Q9H1A3 318 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 RNF167Q9H6Y7 350 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 SEBOXQ9HB31 216 aaPredicted RBP13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 PLGRKTQ9HBL7 147 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 NDUFA13Q9P0J0 144 aa13.8□□□□□ -0.2
SPTLC2-203ENST00000554901 IFITM5A6NNB3 132 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 AIPO00170 330 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 CDRT1O95170 752 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 EGR1P18146 543 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 PRRC2AP48634 2157 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 VBP1P61758 197 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 NCS1P62166 190 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 ZMYND11Q15326 602 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 RSU1Q15404 277 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 FIP1L1Q6UN15 594 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 ACP7Q6ZNF0 438 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 USP43Q70EL4 1123 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 SPICQ8N5J4 248 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 MRPS24Q96EL2 167 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 NAA50Q9GZZ1 169 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 DNTTIP1Q9H147 329 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 TMEM165Q9HC07 324 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 DNAJB11Q9UBS4 358 aa13.79□□□□□ -0.2
SPTLC2-203ENST00000554901 IGHV4-30-2A0A087WSY4 118 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 SMIM31A0A1B0GVY4 71 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 ZNF701M0R085 212 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 BPNT1O95861 308 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 KNG1P01042 644 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 BCL3P20749 454 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 FGF12P61328 243 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 RAB11BQ15907 218 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 DGUOKQ16854 277 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 GLIPR1L1Q6UWM5 242 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 C1QL2Q7Z5L3 287 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 FAM58AQ8N1B3 248 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 BOLLQ8N9W6 283 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 POM121Q96HA1 1249 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 MRI1Q9BV20 369 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 CST11Q9H112 138 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 WDR13Q9H1Z4 485 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 HMG20AQ9NP66 347 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 NLKQ9UBE8 527 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 STEAP1Q9UHE8 339 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 ING4Q9UNL4 249 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
SPTLC2-203ENST00000554901 A0A0G2JK05 382 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 C3orf80F5H4A9 247 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 WNT9BO14905 357 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 CSTBP04080 98 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 SFTPBP07988 381 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 CD80P33681 288 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 NPBWR2P48146 333 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms