RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 DNASE1L1P49184 302 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 IGLV3-21P80748 117 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-203ENST00000554873 FUT7Q11130 342 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 ICAM4Q14773 271 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 FNDC7Q5VTL7 733 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 MRPL41Q8IXM3 137 aaKnown RBP13.77□□□□□ -0.2
SYNE3-203ENST00000554873 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 DNAJA3Q96EY1 480 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 ACY3Q96HD9 319 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 OR8B4Q96RC9 309 aa13.77□□□□□ -0.2
SYNE3-203ENST00000554873 TCRBV21S2A2A0A5A6 115 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-203ENST00000554873 SELEP16581 610 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 OR5I1Q13606 314 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF506Q5JVG8 444 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 C1orf189Q5VU69 101 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 LCN10Q6JVE6 187 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 PLXDC2Q6UX71 529 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 NKAIN3Q8N8D7 197 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 CABLES2Q9BTV7 478 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ANGPTL4Q9BY76 406 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 DNAJC4Q9NNZ3 241 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 SRPK3Q9UPE1 567 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ZFP30Q9Y2G7 519 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 CYB5R3P00387 301 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-203ENST00000554873 RENP00797 406 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 MDKP21741 143 aaPredicted RBP13.77□□□□□ -0.21
SYNE3-203ENST00000554873 FOXF1Q12946 379 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 PMS2P11Q13670 270 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 MEP1BQ16820 701 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 EMC4Q5J8M3 183 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 GPR157Q5UAW9 335 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 Q6ZSR6 202 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ANAPC10Q9UM13 185 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 RHBDD3Q9Y3P4 386 aa13.77□□□□□ -0.21
SYNE3-203ENST00000554873 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-203ENST00000554873 PNPP00491 289 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 TMEM11P17152 192 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 GLRA1P23415 457 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
SYNE3-203ENST00000554873 NOVA1P51513 510 aaKnown RBP13.76□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF117Q03924 483 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 FZD2Q14332 565 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 ETFRF1Q6IPR1 90 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 LYPD6Q86Y78 171 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 OTOSQ8NHW6 89 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 FGGYQ96C11 551 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 NUDT16L1Q9BRJ7 211 aaKnown RBP13.76□□□□□ -0.21
SYNE3-203ENST00000554873 SCGB1D1O95968 90 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 SCGB1D2O95969 90 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 CLPSP04118 112 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-203ENST00000554873 UNC119Q13432 240 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 LHFPL1Q86WI0 220 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 OOSP2Q86WS3 158 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 SLC26A10Q8NG04 563 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 OR1N1Q8NGS0 311 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 IGFLR1Q9H665 355 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 FKBP11Q9NYL4 201 aa13.76□□□□□ -0.21
SYNE3-203ENST00000554873 A0A1B0GU03 582 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 A8MXE2 369 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 IFNA21P01568 189 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 KCNMB1Q16558 191 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 TAF9Q16594 264 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 PRTGQ2VWP7 1150 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 RIPPLY2Q5TAB7 128 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 HNF1AP20823 631 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 ALDH3B1P43353 468 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 LBX1P52954 281 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 TMEM176BQ3YBM2 270 aaPredicted RBP13.75□□□□□ -0.21
SYNE3-203ENST00000554873 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 SSX7Q7RTT5 188 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 ADPRHL1Q8NDY3 354 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 OR5H2Q8NGV7 314 aa13.75□□□□□ -0.21
SYNE3-203ENST00000554873 GON4LQ3T8J9 2241 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 HPRT1P00492 218 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 CA3P07451 260 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 OR10J1P30954 320 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 C1QL3Q5VWW1 255 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 OR13G1Q8NGZ3 307 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
SYNE3-203ENST00000554873 MRGPRX1Q96LB2 322 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 CNTD2Q9H8S5 307 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 OSGIN2Q9Y236 505 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 B3GALT5Q9Y2C3 310 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 RCL1Q9Y2P8 373 aaKnown RBP13.74□□□□□ -0.21
SYNE3-203ENST00000554873 DIRAS3O95661 229 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 HLA-DQA2P01906 255 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 METTL27Q8N6F8 245 aaPredicted RBP13.74□□□□□ -0.21
SYNE3-203ENST00000554873 OR13H1Q8NG92 308 aa13.74□□□□□ -0.21
SYNE3-203ENST00000554873 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
SYNE3-203ENST00000554873 ETV2O00321 342 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms