RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RPS23P62266 143 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 PSG7Q13046 419 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OR8B8Q15620 311 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 TRAM1Q15629 374 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ADIPOQQ15848 244 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF718Q3SXZ3 478 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF672Q499Z4 452 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ACSM3Q53FZ2 586 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 YIF1BQ5BJH7 314 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 FAM27D1Q5T7N8 215 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 GPR107Q5VW38 600 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ASPHD2Q6ICH7 369 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OR2T2Q6IF00 324 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 UNQ6126/PRO20091Q6UXV3 157 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 SLC16A12Q6ZSM3 486 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 KRT74Q7RTS7 529 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 GPR141Q7Z602 305 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 COMMD2Q86X83 199 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 C1orf174Q8IYL3 243 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OR56B2PQ8NGI1 322 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OR13C3Q8NGS6 347 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 SYNPRQ8TBG9 265 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 GPR148Q8TDV2 347 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 RPL3LQ92901 407 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 MRPL24Q96A35 216 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 FGGYQ96C11 551 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ADAT3Q96EY9 351 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 DERL3Q96Q80 235 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 FUNDC2Q9BWH2 189 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 MRPL37Q9BZE1 423 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 NAA50Q9GZZ1 169 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OR51E2Q9H255 320 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 PPIL3Q9H2H8 161 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 OPA3Q9H6K4 179 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 PPP1R3EQ9H7J1 279 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF442Q9H7R0 627 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 TUBG2Q9NRH3 451 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 CA10Q9NS85 328 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 ZNF275Q9NSD4 429 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 MYEF2Q9P2K5 600 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 PURGQ9UJV8 347 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 STUB1Q9UNE7 303 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 CMAHPQ9Y471 501 aa5.34□□□□□ -1.55
SCFD1-212ENST00000554486 CHD3Q12873 2000 aaKnown RBP5.34□□□□□ -1.55
SCFD1-212ENST00000554486 IGLV3-9A0A075B6K5 115 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TRAV8-7A0A075B6U6 113 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TRDV1A0A1B0GX56 115 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 A0A1W2PPK0 400 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 DPPA5A6NC42 116 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ANKRD61A6NGH8 418 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GGT3PA6NGU5 568 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 DHRS7CA6NNS2 312 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 IQCF6A8MYZ5 107 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 MTRF1O75570 445 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CTAG2O75638 210 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GATBO75879 557 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GOSR1O95249 250 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 IGHV3-13P01766 116 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 HLA-DPB1P04440 258 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 UCHL1P09936 223 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 OR4A8P0C604 315 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 OCM2P0CE71 109 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ZNF12P17014 697 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GALP22466 123 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 PSMA1P25786 263 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GCH1P30793 250 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TTKP33981 857 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 Q499Y3 187 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TMEM42Q69YG0 159 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 C22orf42Q6IC83 251 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 Q6ZR03 302 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 PGAP1Q75T13 922 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CEACAM19Q7Z692 300 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 OR5AS1Q8N127 324 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 BHLHE23Q8NDY6 225 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CCDC54Q8NEL0 328 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TSEN15Q8WW01 171 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 GTF3AQ92664 365 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ITFG2Q969R8 447 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 C10orf35Q96D05 121 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ORAI1Q96D31 301 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CHCHD6Q9BRQ6 235 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 FGF23Q9GZV9 251 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 RBM38Q9H0Z9 239 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 RNF167Q9H6Y7 350 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 NOX4Q9NPH5 578 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 LIN7CQ9NUP9 197 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 TXNL4BQ9NX01 149 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CISD1Q9NZ45 108 aaKnown RBP5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ENPP5Q9UJA9 477 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 POU2F3Q9UKI9 436 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 SSR3Q9UNL2 185 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 DHDHQ9UQ10 334 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 PIGLQ9Y2B2 252 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 RHBDD3Q9Y3P4 386 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 CEPT1Q9Y6K0 416 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 USF3Q68DE3 2245 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 ABCA12Q86UK0 2595 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms