RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 Q6ZR54 194 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RBPMS2Q6ZRY4 209 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CYS1Q717R9 158 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 STRADAQ7RTN6 431 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SSX6Q7RTT6 188 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM144Q7Z5S9 345 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ADCK2Q7Z695 626 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CALHM1Q8IU99 346 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CRLF3Q8IUI8 442 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SLC22A15Q8IZD6 547 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM71CQ8NEG0 241 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR11H1Q8NG94 326 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR2AP1Q8NGE2 309 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR52E1Q8NGJ3 308 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR5L1Q8NGL2 311 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR10G7Q8NGN6 311 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR11H2Q8NH07 326 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 PIGXQ8TBF5 258 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FAM45AQ8TCE6 357 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SPPL2AQ8TCT8 520 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 ABHD3Q8WU67 409 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RORBQ92753 470 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 GHSRQ92847 366 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TOMM40LQ969M1 308 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 BIRC7Q96CA5 298 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CPNE2Q96FN4 548 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SMIM10Q96HG1 83 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 AKR1E2Q96JD6 320 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 PRAP1Q96NZ9 151 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 S100A13Q99584 98 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 GABRG3Q99928 467 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 NICN1Q9BSH3 213 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RIOK2Q9BVS4 552 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 BEX2Q9BXY8 128 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TBL1XR1Q9BZK7 514 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 OR2AG1Q9H205 316 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM38AQ9H6F2 299 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 WDR55Q9H6Y2 383 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 GEMIN7Q9H840 131 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RNF121Q9H920 327 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SLC2A9Q9NRM0 540 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 SMCO4Q9NRQ5 59 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 NUFIP1Q9UHK0 495 aaKnown RBP3.73□□□□□ -1.81
ATXN3-225ENST00000554214 FBXL3Q9UKT7 428 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 RNF6Q9Y252 685 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 COLEC10Q9Y6Z7 277 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 LRRK2Q5S007 2527 aa3.73□□□□□ -1.81
ATXN3-225ENST00000554214 PTPRJQ12913 1337 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 KNL1Q8NG31 2342 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 ABCA12Q86UK0 2595 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 A0A096LPI6 279 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TGIF2-C20orf24A0A0A6YYL0 155 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 A0A0G2JND7 137 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 OOEPA6NGQ2 149 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 OR2AG2A6NM03 316 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 C9J4A7 227 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 H3BN98 237 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TRAPPC2LH3BP13 241 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SMLR1H3BR10 107 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 CXCR6O00574 342 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF264O43296 627 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 KLRC4O43908 158 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SAP30O75446 220 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 RP2O75695 350 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 RAD51DO75771 328 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 MT-ND4LP03901 98 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 THY1P04216 161 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 IGHV4-34P06331 123 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SLC35G4P0C7Q5 338 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SPNP16150 400 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TBPP20226 339 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 S100GP29377 79 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 OR3A1P47881 315 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 BIDP55957 195 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 MLF1P58340 268 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 RRAS2P62070 204 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SERTAD2Q14140 314 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TGIF1Q15583 401 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 NEDD8Q15843 81 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 RBBP7Q16576 425 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 DUSP5Q16690 384 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 CYP51A1Q16850 503 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SCGB2B2Q4G0G5 96 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 RFTN2Q52LD8 501 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-225ENST00000554214 NHLRC3Q5JS37 347 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TPRG1LQ5T0D9 272 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 LGSNQ5TDP6 509 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SAMD13Q5VXD3 122 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM215Q68D42 235 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 GLYATQ6IB77 296 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF841Q6ZN19 808 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 Q6ZPB1 254 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-225ENST00000554214 LANCL3Q6ZV70 420 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 CPEB2Q7Z5Q1 589 aaKnown RBP3.72□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF546Q86UE3 836 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 SERPINA9Q86WD7 417 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 CBWD2Q8IUF1 395 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 FUNDC1Q8IVP5 155 aa3.72□□□□□ -1.81
ATXN3-225ENST00000554214 Q8N402 240 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms