RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GTF2H1P32780 548 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CD70P32970 193 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 APLNRP35414 380 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 RPS9P46781 194 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 IDH2P48735 452 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 TTPAP49638 278 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 PPOXP50336 477 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ZNF138P52744 262 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TCL1AP56279 114 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HBG1P69891 147 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HBG2P69892 147 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 PRDX1Q06830 199 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 AESQ08117 197 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 INCA1Q0VD86 236 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ADIGQ0VDE8 80 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CDC20Q12834 499 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HERPUD1Q15011 391 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TMED2Q15363 201 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SNCBQ16143 134 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 IMPG1Q17R60 797 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TBC1D28Q2M2D7 210 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HLA-DRB5Q30154 266 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SLC25A35Q3KQZ1 300 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CHRFAM7AQ494W8 412 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SPIN4Q56A73 249 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TTMPQ5BVD1 217 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TCEAL5Q5H9L2 206 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 AVPI1Q5T686 147 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CST9Q5W186 159 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 DNM1P34Q6PK57 102 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CLEC19AQ6UXS0 136 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 FBXW12Q6X9E4 464 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 Q6ZSR6 202 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CCDC121Q6ZUS5 278 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 H2AFVQ71UI9 128 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 S100A7AQ86SG5 101 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 C10orf67Q8IYJ2 551 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 C11orf72Q8NBR9 251 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 OR10G9Q8NGN4 311 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 OR5M1Q8NGP8 315 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ACTRT1Q8TDG2 376 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CYGBQ8WWM9 190 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 GHSRQ92847 366 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 RAB8BQ92930 207 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TCEAL3Q969E4 200 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SMIM19Q96E16 107 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 GALNT14Q96FL9 552 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SMIM8Q96KF7 97 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 CEP19Q96LK0 163 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 PACRGQ96M98 296 aaPredicted RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 STACQ99469 402 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 HDHD3Q9BSH5 251 aaPredicted RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 TMEM243Q9BU79 118 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 SLC25A31Q9H0C2 315 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 TPK1Q9H3S4 243 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 MAP1LC3AQ9H492 121 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 FBXO6Q9NRD1 293 aaPredicted RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 DMAC2Q9NW81 257 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 RBFOX1Q9NWB1 397 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 ZNF581Q9P0T4 197 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 FARSAQ9Y285 508 aaKnown RBP1.62□□□□□ -2.15
SRP54-204ENST00000553923 TP53TG5Q9Y2B4 290 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 ALG5Q9Y673 324 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 EVC2Q86UK5 1308 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 AK9Q5TCS8 1911 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 FER1L5A0AVI2 2057 aa1.62□□□□□ -2.15
SRP54-204ENST00000553923 KIAA0232Q92628 1395 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 A0A0J9YXV3 536 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CEACAM18A8MTB9 384 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 ZNF705GA8MUZ8 300 aaPredicted RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 C21orf140B9A014 251 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 F5H5K5 113 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 H0Y9J4 135 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 I3L4J1 428 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 M0R1X1 148 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 MANBAO00462 879 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CXCR6O00574 342 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 REM1O75628 298 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 ZNF189O75820 626 aaPredicted RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 SEMA3DO95025 777 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SOX14O95416 240 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CTDNEP1O95476 244 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 HSPB1P04792 205 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 ISG15P05161 165 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 RPSAP08865 295 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 CTXN2P0C2S0 81 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CD99P14209 185 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 AKR1C4P17516 323 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TAC1P20366 129 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TSPOP30536 169 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 PYCR1P32322 319 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 OMPP47874 163 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TGM4P49221 684 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 GNG10P50151 68 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SULT1A2P50226 295 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SERPINB9P50453 376 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CCL23P55773 120 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 NUP107P57740 925 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms