RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 FBXW5Q969U6 566 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 Q96M66 194 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ST6GALNAC5Q9BVH7 336 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 METTL9Q9H1A3 318 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CD300LBA8K4G0 201 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 GEMIN2O14893 280 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CD74P04233 296 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 FUT6P51993 359 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 NDUFA5Q16718 116 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 TMED4Q7Z7H5 227 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 OR13C8Q8NGS7 320 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 OR6K3Q8NGY3 331 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 OR51F2Q8NH61 342 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 IL36RNQ9UBH0 155 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CHD8Q9HCK8 2581 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 FAM87AP0C7U9 286 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ATP1B3P54709 279 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 TGFBR3Q03167 851 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 MICBQ29980 383 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 FBXL14Q8N1E6 418 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 Q8NA96 180 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 FAAP24Q9BTP7 215 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 TM2D1Q9BX74 207 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 OR2J1Q9GZK6 312 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 ACTR6Q9GZN1 396 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 MOV10Q9HCE1 1003 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 CA10Q9NS85 328 aa10.95□□□□□ -0.66
VIPAS39-206ENST00000553888 NBEAQ8NFP9 2946 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 ICE1Q9Y2F5 2266 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 FAM221AA4D161 298 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 OR14I1A6ND48 311 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF732B4DXR9 585 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 FABP7O15540 132 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CGAP01215 116 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 RAG2P55895 527 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CXADRP78310 365 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 DAZAP2Q15038 168 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 C2orf68Q2NKX9 166 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 RNASE10Q5GAN6 216 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 SLC36A1Q7Z2H8 476 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 GHRLQ9UBU3 117 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 A0A1B0GUH1 482 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 SMPD2O60906 423 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 WDR1O75083 606 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 GSTP1P09211 210 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 COX5AP20674 150 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CA6P23280 308 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CPT2P23786 658 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CDH24Q86UP0 819 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 TCTE3Q8IZS6 198 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 UXS1Q8NBZ7 420 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 STEAP2Q8NFT2 490 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 ST8SIA4Q92187 359 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 CHIAQ9BZP6 476 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 PLSCR4Q9NRQ2 329 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 ING3Q9NXR8 418 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 PROCRQ9UNN8 238 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 RAXQ9Y2V3 346 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 MSRB2Q9Y3D2 182 aa10.94□□□□□ -0.66
VIPAS39-206ENST00000553888 PQLC2LA1A4F0 135 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 MBD3L4A6NDZ8 208 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 MBD3L5A6NJ08 208 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 OR2AT4A6NND4 320 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 K7ENP7 123 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SCGNO76038 276 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 BCL3P20749 454 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 MAB21L1Q13394 359 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 INO80CQ6PI98 192 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 ZDHHC23Q8IYP9 409 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 MBD3L2Q8NHZ7 208 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 PLEKHJ1Q9NW61 149 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 FZR1Q9UM11 496 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 VSIG4Q9Y279 399 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 ATRXP46100 2492 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SDCBPO00560 298 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SYNGR1O43759 233 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SULT1A3P0DMM9 295 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 SULT1A4P0DMN0 295 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 IFITM2Q01629 132 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 Q5BKY6 102 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
VIPAS39-206ENST00000553888 OR2A2Q6IF42 318 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms