RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SGCAQ16586 387 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ACP7Q6ZNF0 438 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 STRADAQ7RTN6 431 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 HORMAD1Q86X24 394 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 FAM71AQ8IYT1 594 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CHST4Q8NCG5 386 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 DUSP18Q8NEJ0 188 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 OR4A15Q8NGL6 344 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 LKAAEAR1Q8TD35 194 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 AURKBQ96GD4 344 aaPredicted RBP2.09□□□□□ -2.07
SCFD1-210ENST00000553693 RNF170Q96K19 258 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ATP6V1G3Q96LB4 118 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 FOXC2Q99958 501 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 LXNQ9BS40 222 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SLC25A2Q9BXI2 301 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 C6orf50Q9HD87 102 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SLCO1B3Q9NPD5 702 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CLN6Q9NWW5 311 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 ZNF226Q9NYT6 803 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 SLC25A37Q9NYZ2 338 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CLCF1Q9UBD9 225 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CTSFQ9UBX1 484 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 CD84Q9UIB8 345 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 BOD1L1Q8NFC6 3051 aa2.09□□□□□ -2.07
SCFD1-210ENST00000553693 NID2Q14112 1375 aa2.09□□□□□ -2.08
SCFD1-210ENST00000553693 KIAA1549LQ6ZVL6 1849 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 MYO16Q9Y6X6 1858 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 IGKV1D-13A0A0B4J2D9 117 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 H7C2Y5 167 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 K7ERQ8 282 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 M0QX08 132 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 GABARAPO95166 117 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 C6orf47O95873 294 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CD160O95971 181 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 HLA-DPB1P04440 258 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 IGKV1-13P0DP09 117 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 KCNE1P15382 129 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CRISP2P16562 243 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CSNK2A2P19784 350 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TUBG1P23258 451 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TUFMP49411 452 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 P2RX1P51575 399 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 UBE2NP61088 152 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 RPS15AP62244 130 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ARG2P78540 354 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 KDSRQ06136 332 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 DMTNQ08495 405 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 VAMP3Q15836 100 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 USF2Q15853 346 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TTLL9Q3SXZ7 439 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 VAX1Q5SQQ9 334 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 KPRPQ5T749 579 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 HES5Q5TA89 166 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 SDHAF4Q5VUM1 108 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 PRMT9Q6P2P2 845 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TEX43Q6ZNM6 134 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF493Q6ZR52 646 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 SLC35D2Q76EJ3 337 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 C6orf120Q7Z4R8 191 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ST13P4Q8IZP2 240 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CSGALNACT2Q8N6G5 542 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 LINC00469Q8N7U9 141 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 GATSQ8NAP1 163 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 UBAC2Q8NBM4 344 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 OR56A4Q8NGH8 313 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 OR52E2Q8NGJ4 325 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 OR4S2Q8NH73 311 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ACTRT1Q8TDG2 376 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TCP10LQ8TDR4 215 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ASZ1Q8WWH4 475 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CREB3L1Q96BA8 519 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 CCDC124Q96CT7 223 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 KCNS3Q9BQ31 491 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 HDHD3Q9BSH5 251 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 SYNDIG1Q9H7V2 258 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 ACP6Q9NPH0 428 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 TUBG2Q9NRH3 451 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 RBAKQ9NYW8 714 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 RCL1Q9Y2P8 373 aaKnown RBP2.08□□□□□ -2.08
SCFD1-210ENST00000553693 PTPRQQ9UMZ3 2332 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 PI4KAP42356 2102 aa2.08□□□□□ -2.08
SCFD1-210ENST00000553693 NUP210Q8TEM1 1887 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 LRBAP50851 2863 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TRAV19A0A0A6YYK7 116 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 LINC00854A0A1B0GVQ3 168 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 A6NDN8 102 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 PDZK1P1A8MUH7 402 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 HACD1B0YJ81 288 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 LAD1O00515 517 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 SPAG7O75391 227 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 LYPLA2O95372 231 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 UTS2O95399 124 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 APODP05090 189 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 EIF4EP06730 217 aaKnown RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 RHOCP08134 193 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR8U9P0C7N5 309 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR5H8P0DN80 308 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 IGHV3-43DP0DP04 118 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CTRB1P17538 263 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms