RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 NF1P21359 2839 aa18.97■□□□□ 0.63
TDP1-206ENST00000553569 IGHV2-70DA0A0C4DH43 119 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 C22orf46C9J442 243 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 DVL1O14640 695 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 FCN3O75636 299 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 SELLP14151 372 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 AMY2BP19961 511 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 GABRA2P47869 451 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 SLC25A26Q70HW3 274 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 PARP16Q8N5Y8 322 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 OR5D14Q8NGL3 314 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 ANGPTL6Q8NI99 470 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 NRIP2Q9BQI9 281 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 CDCA4Q9BXL8 241 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 RASL12Q9NYN1 266 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 TAS2R4Q9NYW5 299 aa18.96■□□□□ 0.63
TDP1-206ENST00000553569 NIPBLQ6KC79 2804 aaeCLIP18.96■□□□□ 0.63
TDP1-206ENST00000553569 RGS10O43665 173 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 SULT1B1O43704 296 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 MT-ND2P03891 347 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 CD2P06729 351 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 HCKP08631 526 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 PSG2P11465 335 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 ADRA2CP18825 462 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 CRHBPP24387 322 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 PAX2Q02962 417 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 BTNL3Q6UXE8 466 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 C1orf229Q6ZS94 237 aaPredicted RBP18.95■□□□□ 0.62
TDP1-206ENST00000553569 RAB40AQ8WXH6 277 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 TMEM106AQ96A25 262 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 PGLYRP3Q96LB9 341 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 GAFA1Q96PS6 74 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 NUDT16L1Q9BRJ7 211 aaKnown RBP18.95■□□□□ 0.62
TDP1-206ENST00000553569 CCDC90BQ9GZT6 254 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 Q9H521 79 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 DUSP21Q9H596 190 aa18.95■□□□□ 0.62
TDP1-206ENST00000553569 IGKV1D-17A0A075B6S4 117 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 NDUFB3O43676 98 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 NOS1APO75052 506 aaPredicted RBP18.94■□□□□ 0.62
TDP1-206ENST00000553569 CELP19835 753 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 RNLSQ5VYX0 342 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 ZNF788Q6ZQV5 615 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 RNF144BQ7Z419 303 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 OR5D18Q8NGL1 313 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 CEP19Q96LK0 163 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 OR5M11Q96RB7 305 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 MRI1Q9BV20 369 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 DNTTIP1Q9H147 329 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 NEK6Q9HC98 313 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 MTCH1Q9NZJ7 389 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 OPN4Q9UHM6 478 aa18.94■□□□□ 0.62
TDP1-206ENST00000553569 SPRY1O43609 319 aaPredicted RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 ENSAO43768 121 aaKnown RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 CEBPDP49716 269 aaPredicted RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 IL13RA1P78552 427 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 IRF3Q14653 427 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 MED22Q15528 200 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 YIF1BQ5BJH7 314 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 LRRC10Q5BKY1 277 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 RBM48Q5RL73 367 aaKnown RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 ATPAF1Q5TC12 328 aaPredicted RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 CD276Q5ZPR3 534 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 PRIMA1Q86XR5 153 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 HES4Q9HCC6 221 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 OR14J1Q9UGF5 321 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 ZNF222Q9UK12 451 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 LSM2Q9Y333 95 aaKnown RBP18.93■□□□□ 0.62
TDP1-206ENST00000553569 AUP1Q9Y679 476 aa18.93■□□□□ 0.62
TDP1-206ENST00000553569 TRBV5-5A0A0J9YX44 114 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 RFPL4AA6NLU0 287 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 RFPL4AL1F8VTS6 287 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 F8VVB4 439 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 F8VWA3 439 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 SIGLEC5O15389 551 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 CYB5AP00167 134 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 RAB3AP20336 220 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 EEF1B2P24534 225 aaKnown RBP18.92■□□□□ 0.62
TDP1-206ENST00000553569 ERVK11-1P61568 191 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 DGUOKQ16854 277 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 ASPHD2Q6ICH7 369 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 BTN2A1Q7KYR7 527 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 MKXQ8IYA7 352 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 OR51A2Q8NGJ7 313 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 DACT3Q96B18 629 aaPredicted RBP18.92■□□□□ 0.62
TDP1-206ENST00000553569 ORAI1Q96D31 301 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 MED30Q96HR3 178 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 BLOC1S6Q9UL45 172 aa18.92■□□□□ 0.62
TDP1-206ENST00000553569 ANGPTL7O43827 346 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 ACAA1P09110 424 aaPredicted RBP18.91■□□□□ 0.62
TDP1-206ENST00000553569 BCL3P20749 454 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 RPS11P62280 158 aaKnown RBP eCLIP18.91■□□□□ 0.62
TDP1-206ENST00000553569 BDH1Q02338 343 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 PDZK1IP1Q13113 114 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 SPHARQ15513 63 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 Q499Y3 187 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 C1QL2Q7Z5L3 287 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 TEX29Q8N6K0 151 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 CD177Q8N6Q3 437 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 TMEM185AQ8NFB2 350 aa18.91■□□□□ 0.62
TDP1-206ENST00000553569 H1FXQ92522 213 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms