RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 GTF2F2P13984 249 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 BCL3P20749 454 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 SERPINF1P36955 418 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 CD200P41217 278 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 VEGFCP49767 419 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 ZNF81P51508 661 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 NKPD1Q17RQ9 610 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 ZNF181Q2M3W8 571 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 RGS21Q2M5E4 152 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 ELP2Q6IA86 826 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 C11orf53Q8IXP5 236 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 Q8N402 240 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 ACBD4Q8NC06 268 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 OR51T1Q8NGJ9 327 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 C15orf40Q8WUR7 153 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 MRPS24Q96EL2 167 aaKnown RBP11.67□□□□□ -0.54
APEX1-205ENST00000553555 SELENOIQ9C0D9 397 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 TLNRD1Q9H1K6 362 aa11.67□□□□□ -0.54
APEX1-205ENST00000553555 CISD1Q9NZ45 108 aaKnown RBP11.67□□□□□ -0.54
APEX1-205ENST00000553555 RALYQ9UKM9 306 aaKnown RBP11.67□□□□□ -0.54
APEX1-205ENST00000553555 SPTAN1Q13813 2472 aaKnown RBP11.66□□□□□ -0.54
APEX1-205ENST00000553555 SPRY3O43610 288 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 RHBDL1O75783 438 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 SCGNO76038 276 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 PTBP3O95758 552 aaKnown RBP11.66□□□□□ -0.54
APEX1-205ENST00000553555 CSF3P09919 207 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 RNF224P0DH78 156 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
APEX1-205ENST00000553555 OSR2Q8N2R0 312 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 OR56B1Q8NGI3 324 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 OR10R2Q8NGX6 335 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 Q96M66 194 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 DHRS9Q9BPW9 319 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 NUDT16L1Q9BRJ7 211 aaKnown RBP11.66□□□□□ -0.54
APEX1-205ENST00000553555 ZDHHC8Q9ULC8 765 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 DYSFO75923 2080 aa11.66□□□□□ -0.54
APEX1-205ENST00000553555 UBR5O95071 2799 aaPredicted RBP11.65□□□□□ -0.54
APEX1-205ENST00000553555 IGHV3-64DA0A0J9YX35 117 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 FOXI3A8MTJ6 420 aaPredicted RBP11.65□□□□□ -0.54
APEX1-205ENST00000553555 F8VVB4 439 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 F8VWA3 439 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 CDIPTO14735 213 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 SOCS1O15524 211 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 AKR7A2O43488 359 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 GSTZ1O43708 216 aaPredicted RBP11.65□□□□□ -0.54
APEX1-205ENST00000553555 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
APEX1-205ENST00000553555 IL7P13232 177 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 TMEM50BP56557 158 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 SRSF1Q07955 248 aaKnown RBP eCLIP11.65□□□□□ -0.546e-8■□□□□ 10.1
APEX1-205ENST00000553555 EFNB3Q15768 340 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 BATF2Q8N1L9 274 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 CELF2-AS1Q8N7Q2 184 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 ZNF488Q96MN9 340 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 AUNIPQ9H7T9 357 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 RHOFQ9HBH0 211 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
APEX1-205ENST00000553555 B9A039 149 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 IGHV1-46P01743 117 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 ADH4P08319 380 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 PTHLHP12272 177 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 CPT2P23786 658 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 FGF12P61328 243 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 MRPS10P82664 201 aaKnown RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 MPPED2Q15777 294 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 MST1LQ2TV78 715 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 ZNF260Q3ZCT1 412 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 STEAP3Q658P3 488 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 CHST4Q8NCG5 386 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 MEGF10Q96KG7 1140 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 RBFOX1Q9NWB1 397 aaKnown RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 IL19Q9UHD0 177 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 ST3GAL6Q9Y274 331 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 C17orf100A8MU93 164 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 GABARAPH6UMI1 98 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 NOS1APO75052 506 aaPredicted RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 PGA5P0DJD9 388 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 SRP9P49458 86 aaKnown RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 DGCR2P98153 550 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 TAF9Q16594 264 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 PIGYQ3MUY2 71 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 SPRNQ5BIV9 151 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 DNM1P46Q6ZS02 220 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 ZNF826PQ6ZT77 177 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 SMIM4Q8WVI0 70 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 ITLN1Q8WWA0 313 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 GCDHQ92947 438 aaPredicted RBP11.64□□□□□ -0.55
APEX1-205ENST00000553555 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
APEX1-205ENST00000553555 UFSP2Q9NUQ7 469 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms