RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 OR5A2Q8NGI9 324 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 NRIP2Q9BQI9 281 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 TMEM133Q9H2Q1 129 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 MED20Q9H944 212 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 HES4Q9HCC6 221 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 SAR1AQ9NR31 198 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 ZFP57Q9NU63 452 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 ZNF256Q9Y2P7 627 aaPredicted RBP10.17□□□□□ -0.78
VPS29-211ENST00000553128 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 CDH10Q9Y6N8 788 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 V9GYQ6 96 aa10.17□□□□□ -0.78
VPS29-211ENST00000553128 FAM172BPA6NC97 362 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 SEC14L6B5MCN3 397 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 EDF1O60869 148 aaKnown RBP10.16□□□□□ -0.78
VPS29-211ENST00000553128 HAAOP46952 286 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 IL18R1Q13478 541 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 EDDM3AQ14507 147 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 KRT72Q14CN4 511 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 SNAPC1Q16533 368 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 PLCXD3Q63HM9 321 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 PLBD1Q6P4A8 553 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 OR4Q3Q8NH05 313 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 FAM81AQ8TBF8 368 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 GNPDA2Q8TDQ7 276 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 INTS14Q96SY0 518 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 CDRT15Q96T59 188 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 SLC22A13Q9Y226 551 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 DSCAML1Q8TD84 2053 aa10.16□□□□□ -0.78
VPS29-211ENST00000553128 TMEM82A0PJX8 343 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 OR5B21A6NL26 309 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 F8VVB4 439 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 F8VWA3 439 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 J3QT63 122 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 NOS1APO75052 506 aaPredicted RBP10.15□□□□□ -0.78
VPS29-211ENST00000553128 LY86O95711 162 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 SEMG1P04279 462 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 FRMD6-AS1P0C7T7 363 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 SLC6A1P30531 599 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 BRS3P32247 399 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 MAPRE2Q15555 327 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 UTF1Q5T230 341 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 OR9Q2Q8NGE9 314 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 OR52L1Q8NGH7 329 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 OR5M8Q8NGP6 311 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 DCLRE1BQ9H816 532 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 KLHDC2Q9Y2U9 406 aa10.15□□□□□ -0.78
VPS29-211ENST00000553128 FAM183AA6NL82 134 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 LINC01548A6NM66 108 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 DNAJC8O75937 253 aaPredicted RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 RPLP1P05386 114 aaKnown RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 GSTT1P30711 240 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 RRM2P31350 389 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 MAP2K3P46734 347 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 NUDT2P50583 147 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 GP2P55259 537 aaKnown RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 ERVK11-1P61568 191 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 BDH1Q02338 343 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 ZNF260Q3ZCT1 412 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 PRAMEF5Q5TYX0 476 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 GDPD3Q7L5L3 318 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 TRPM8Q7Z2W7 1104 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 ABHD12Q8N2K0 398 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 CHPT1Q8WUD6 406 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 BTBD10Q9BSF8 475 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 DCAF13Q9NV06 445 aaKnown RBP10.14□□□□□ -0.79
VPS29-211ENST00000553128 IL20Q9NYY1 176 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 AP3M1Q9Y2T2 418 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 LYVE1Q9Y5Y7 322 aa10.14□□□□□ -0.79
VPS29-211ENST00000553128 SERPINE3A8MV23 424 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 SELENOFO60613 162 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 GDNFP39905 211 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
VPS29-211ENST00000553128 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
VPS29-211ENST00000553128 ARPINQ7Z6K5 226 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 ANGPTL5Q86XS5 388 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 OR8H2Q8N162 312 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 OR52N4Q8NGI2 321 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 THEM6Q8WUY1 208 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
VPS29-211ENST00000553128 TSSK6Q9BXA6 273 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 CHST6Q9GZX3 395 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 NIPAL2Q9H841 368 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 PAPOLBQ9NRJ5 636 aaKnown RBP10.13□□□□□ -0.79
VPS29-211ENST00000553128 GPR173Q9NS66 373 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 INTS9Q9NV88 658 aaKnown RBP10.13□□□□□ -0.79
VPS29-211ENST00000553128 ARMC1Q9NVT9 282 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 PIGLQ9Y2B2 252 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 MOB4Q9Y3A3 225 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 LINC00312Q9Y6C7 94 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 HSPE1-MOB4S4R3N1 261 aa10.13□□□□□ -0.79
VPS29-211ENST00000553128 hADV38S2A0JD32 116 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 PQLC2LA1A4F0 135 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms