RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 FAM71E2Q8N5Q1 922 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 DRAM1Q8N682 238 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 FAM216BQ8N7L0 139 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 DNAAF1Q8NEP3 725 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 OR6Q1Q8NGQ2 317 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 OR4Q3Q8NH05 313 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 BBS10Q8TAM1 723 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 LRRC29Q8WV35 223 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 ASB10Q8WXI3 467 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 CORO2AQ92828 525 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 MCUR1Q96AQ8 359 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 SLCO4A1Q96BD0 722 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 TESCQ96BS2 214 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 ITCHQ96J02 903 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 TMEM68Q96MH6 324 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 OR14A2Q96R54 314 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 MYCBPQ99417 103 aaPredicted RBP4.05□□□□□ -1.76
CKAP4-203ENST00000553039 TUBA4BQ9H853 241 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 RANGRFQ9HD47 186 aaPredicted RBP4.05□□□□□ -1.76
CKAP4-203ENST00000553039 ARL8BQ9NVJ2 186 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 NDE1Q9NXR1 346 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 ATPIF1Q9UII2 106 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 ZNF391Q9UJN7 358 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 NDUFAF1Q9Y375 327 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 MINOS1-NBL1R4GNA1 71 aa4.05□□□□□ -1.76
CKAP4-203ENST00000553039 NUPR2A6NF83 97 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 GGT3PA6NGU5 568 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 A6NIZ1 184 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 CD300LBA8K4G0 201 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 NPIPB11E5RHQ5 1161 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 CCRL2O00421 344 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 BHLHE40O14503 412 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 SERPINB7O75635 380 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 OR2F2O95006 317 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 IGHA1P01876 353 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 BCHEP06276 602 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 T-ENOLP0DO92 83 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 COX4I1P13073 169 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 SPNP16150 400 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 HTR2AP28223 471 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 NUDT2P50583 147 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RGS8P57771 180 aaPredicted RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DSTNP60981 165 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RAP1BP61224 184 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 LSM6P62312 80 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RAP1AP62834 184 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RPL18Q07020 188 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DYNC1I2Q13409 638 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 AQP6Q13520 282 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 CYLC2Q14093 348 aaPredicted RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 GK2Q14410 553 aaPredicted RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 MAPK11Q15759 364 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 PNLIPRP3Q17RR3 467 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RNLSQ5VYX0 342 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 ZNF770Q6IQ21 691 aaPredicted RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 ZNF788Q6ZQV5 615 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 C18orf65Q6ZTR6 163 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 FOXL2NBQ6ZUU3 175 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 MOB3CQ70IA8 216 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 MRPL21Q7Z2W9 205 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DPY19L4Q7Z388 723 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 LYPD6Q86Y78 171 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DYNAPQ8N1N2 210 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 FGFRL1Q8N441 504 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 LNX2Q8N448 690 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 TSPAN14Q8NG11 270 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 OR5T2Q8NGG2 359 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 OR8S1Q8NH09 359 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 SLC7A6Q92536 515 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RBM14Q96PK6 669 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 OR52E6Q96RD3 313 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 BTBD10Q9BSF8 475 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 SLC25A33Q9BSK2 321 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 THAP7Q9BT49 309 aaPredicted RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 RAD21L1Q9H4I0 556 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 EFCAB1Q9HAE3 211 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 POLE4Q9NR33 117 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 PAPOLBQ9NRJ5 636 aaKnown RBP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 ASIC5Q9NY37 505 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 USE1Q9NZ43 259 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DKK2Q9UBU2 259 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.04□□□□□ -1.76
CKAP4-203ENST00000553039 DHDHQ9UQ10 334 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 HILPDAQ9Y5L2 63 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
CKAP4-203ENST00000553039 LYSTQ99698 3801 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 IGKV1D-43A0A0B4J1Z2 117 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 CXorf65A6NEN9 183 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 TRIM64CA6NLI5 447 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 BBIP1A8MTZ0 92 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 SERPINE3A8MV23 424 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 H3BSH0 61 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 AP4M1O00189 453 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 RFXANKO14593 260 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 ANGPT2O15123 496 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 SIGLEC5O15389 551 aa4.03□□□□□ -1.76
CKAP4-203ENST00000553039 CHP2O43745 196 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms