RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RBPJQ06330 500 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 KLRB1Q12918 225 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 PRDX4Q13162 271 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 PCGF3Q3KNV8 242 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 CD276Q5ZPR3 534 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 FAHD2BQ6P2I3 314 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-216ENST00000552800 RFPL4BQ6ZWI9 263 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 MOB3CQ70IA8 216 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 SLC36A1Q7Z2H8 476 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ZNF573Q86YE8 665 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 TCTE3Q8IZS6 198 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 OSR2Q8N2R0 312 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ARRDC1Q8N5I2 433 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 CISD2Q8N5K1 135 aaKnown RBP8.4□□□□□ -1.06
TMEM116-216ENST00000552800 OR4C16Q8NGL9 310 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 FAHD2AQ96GK7 314 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 SPACA5Q96QH8 159 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 NICN1Q9BSH3 213 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 PECRQ9BY49 303 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 OR51I2Q9H344 312 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 KCNK15Q9H427 330 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 MCUBQ9NWR8 336 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 RCC2Q9P258 522 aaKnown RBP8.4□□□□□ -1.06
TMEM116-216ENST00000552800 ING4Q9UNL4 249 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 NPTNQ9Y639 398 aa8.4□□□□□ -1.06
TMEM116-216ENST00000552800 IGLV3-9A0A075B6K5 115 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 IGHV1-18A0A0C4DH31 117 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 A0A0G2JNJ9 132 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 A0A1W2PP11 408 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 TMEM210A6NLX4 147 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ANKRD30BLA7E2S9 258 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ZNF736B4DX44 427 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CRTAPO75718 401 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CYB5AP00167 134 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CD3DP04234 171 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CECR9P0C854 216 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 TMEM225BP0DP42 221 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PTHLHP12272 177 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CCL2P13500 99 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CHATP28329 748 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 GLRXP35754 106 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 RRAS2P62070 204 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 NKX6-1P78426 367 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PSG7Q13046 419 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 IL13RA2Q14627 380 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 GRK1Q15835 563 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 MPV17LQ2QL34 196 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 SLC22A6Q4U2R8 563 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PLCXD3Q63HM9 321 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 MYPOPQ86VE0 399 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 FJX1Q86VR8 437 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 LHFPL1Q86WI0 220 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CALHM1Q8IU99 346 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ZDHHC22Q8N966 263 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ST6GALNAC3Q8NDV1 305 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 OR8G5Q8NG78 346 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 OR51F2Q8NH61 342 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 KLF14Q8TD94 323 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 FBXW5Q969U6 566 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ARHGAP5-AS1Q96IT6 56 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 HIST1H2AAQ96QV6 131 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PRRT1Q99946 306 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 DHRS9Q9BPW9 319 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 OPN3Q9H1Y3 402 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 CDH20Q9HBT6 801 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ETAA1Q9NY74 926 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 TREM2Q9NZC2 230 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PTTG3PQ9NZH4 202 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 Q9UFV3 132 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 ZNF221Q9UK13 617 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 HEATR1Q9H583 2144 aaKnown RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 SPTBN4Q9H254 2564 aa8.39□□□□□ -1.07
TMEM116-216ENST00000552800 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
TMEM116-216ENST00000552800 A0A0A6YYJ9 748 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 IGHV2OR16-5A0A0B4J2B6 119 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 LINC00854A0A1B0GVQ3 168 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 LRP5LA4QPB2 252 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 TMEM235A6NFC5 223 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 SNAPC5O75971 98 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 RAB3DO95716 219 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 CSTBP04080 98 aaKnown RBP8.38□□□□□ -1.07
TMEM116-216ENST00000552800 CELA3BP08861 270 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 PPP3CBP16298 524 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 GNB3P16520 340 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 HLA-GP17693 338 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 FUT3P21217 361 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 CCNOP22674 350 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 LMO1P25800 156 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 BLVRBP30043 206 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-216ENST00000552800 HOXC12P31275 282 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 IDH3GP51553 393 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-216ENST00000552800 CCR6P51684 374 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 RBM11P57052 281 aaKnown RBP8.38□□□□□ -1.07
TMEM116-216ENST00000552800 NAAAQ02083 359 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 DHODHQ02127 395 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 MADCAM1Q13477 382 aa8.38□□□□□ -1.07
TMEM116-216ENST00000552800 HLXQ14774 488 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms