RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 OR4M1Q8NGD0 313 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF488Q96MN9 340 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 WNT10AQ9GZT5 417 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 ABCB10Q9NRK6 738 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 DNAJB9Q9UBS3 223 aa10.38□□□□□ -0.75
PTCH1-221ENST00000550914 KIAA2026Q5HYC2 2103 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 AQP12BA6NM10 295 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 PSMD9O00233 223 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 SRSF10O75494 262 aaKnown RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 TTRP02766 147 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 PRB2P02812 416 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 ALDOBP05062 364 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF728P0DKX0 622 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CD28P10747 220 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CALB2P22676 271 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 ACTR3P61158 418 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 IL24Q13007 206 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 DMRTC1Q5HYR2 192 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 HIST2H2BDQ6DRA6 164 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CCBE1Q6UXH8 406 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF782Q6ZMW2 699 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 AQP12AQ8IXF9 295 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 MRAPQ8TCY5 172 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 DNAJC9Q8WXX5 260 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 R3HDM4Q96D70 268 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CNN2Q99439 309 aaKnown RBP10.37□□□□□ -0.75
PTCH1-221ENST00000550914 MNTQ99583 582 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 PKIBQ9C010 78 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 MMP28Q9H239 520 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 V9GYS6 101 aa10.37□□□□□ -0.75
PTCH1-221ENST00000550914 CCDC182A6NF36 153 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 PRR32B1ATL7 298 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 LOC110117498-PIK3R3F6TDL0 507 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 PEX14O75381 377 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 ARG1P05089 322 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 CHRM2P08172 466 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 GNGT1P63211 74 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-221ENST00000550914 MFGE8Q08431 387 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-221ENST00000550914 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-221ENST00000550914 SNAPC1Q16533 368 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 ELMOD2Q8IZ81 293 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 CANT1Q8WVQ1 401 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 SGCDQ92629 289 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
PTCH1-221ENST00000550914 SEBOXQ9HB31 216 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-221ENST00000550914 OR14J1Q9UGF5 321 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 IKZF2Q9UKS7 526 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 COPS3Q9UNS2 423 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 SLC22A13Q9Y226 551 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 R4GMQ9 66 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
PTCH1-221ENST00000550914 A0A1B0GTI1 187 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 H3BUI4 141 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF737O75373 536 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 MRPL3P09001 348 aaKnown RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 IGHV1-8P0DP01 117 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 PIPP12273 146 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 AZGP1P25311 298 aaKnown RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 RAB13P51153 203 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 OR12D2P58182 307 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 SSX2Q16385 188 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 BCL2L15Q5TBC7 163 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 TMEM236Q5W0B7 351 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 ZNF322Q6U7Q0 402 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 ASRGL1Q7L266 308 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 TMEM219Q86XT9 240 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 HS3ST5Q8IZT8 346 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 LYG1Q8N1E2 194 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 ASCC1Q8N9N2 400 aaKnown RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 WFDC9Q8NEX5 89 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 PHF21AQ96BD5 680 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 NRBF2Q96F24 287 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-221ENST00000550914 PRRG3Q9BZD7 231 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 GPR173Q9NS66 373 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 TVP23BQ9NYZ1 205 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 OR52A1Q9UKL2 312 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 SNX5Q9Y5X3 404 aa10.35□□□□□ -0.75
PTCH1-221ENST00000550914 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 CCL1P22362 96 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 PRKACGP22612 351 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 CRISP1P54107 249 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 CXCR4P61073 352 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 ESRRGP62508 458 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 COL10A1Q03692 680 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 PLA1AQ53H76 456 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 GDPD3Q7L5L3 318 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms