RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SLC22A1O15245 554 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 NOS1APO75052 506 aaPredicted RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 CDRT1O95170 752 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 IGHV2-70P01814 119 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 SFTPBP07988 381 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 OCMP0CE72 109 aaPredicted RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 CALCBP10092 127 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 SLC2A2P11168 524 aaPredicted RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 GIFP27352 417 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 PTGFRP43088 359 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 MXD1Q05195 221 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 SPCS2Q15005 226 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 ZMYND11Q15326 602 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 CARTPTQ16568 116 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 HFEQ30201 348 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 Q5PR19 223 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 CDH26Q8IXH8 852 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 BOLLQ8N9W6 283 aaKnown RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 OR11L1Q8NGX0 322 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 ISOC1Q96CN7 298 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 DLL4Q9NR61 685 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
ERBB3-215ENST00000550828 EDARQ9UNE0 448 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 V9GY05 133 aa11.32□□□□□ -0.6
ERBB3-215ENST00000550828 A0A096LNT2 108 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 H3BMQ9 156 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 SLC17A2O00624 439 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 MAGEB3O15480 346 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 KDM4BO94953 1096 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
ERBB3-215ENST00000550828 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 CD99P14209 185 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 AMY2BP19961 511 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 RAB3BP20337 219 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 CFPP27918 469 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
ERBB3-215ENST00000550828 PDLIM4P50479 330 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 CLDN12P56749 244 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 QRFPP83859 136 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 PLA2G7Q13093 441 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 P2RY14Q15391 338 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 HES5Q5TA89 166 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 ZSCAN4Q8NAM6 433 aaPredicted RBP11.31□□□□□ -0.6
ERBB3-215ENST00000550828 PXT1Q8NFP0 134 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 CYYR1Q96J86 154 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 GPER1Q99527 375 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 FOXC2Q99958 501 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 UQCC2Q9BRT2 126 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 BARHL1Q9BZE3 327 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 BPESC1Q9GZL8 116 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 NEK6Q9HC98 313 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
ERBB3-215ENST00000550828 WIPI2Q9Y4P8 454 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 MALRD1Q5VYJ5 2156 aa11.31□□□□□ -0.6
ERBB3-215ENST00000550828 ZNF469Q96JG9 3925 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 A0A1B0GW55 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 CLDN25C9JDP6 229 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 IFNL4K9M1U5 179 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 PPIHO43447 177 aaKnown RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 FCN3O75636 299 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L2P0CJ85 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L3P0CJ86 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L4P0CJ87 422 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L5P0CJ88 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L6P0CJ89 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L7P0CJ90 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 SERPINB10P48595 397 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 ART1P52961 327 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 TMBIM6P55061 237 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 GLT8D1Q68CQ7 371 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 SFRP4Q6FHJ7 346 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 ACP7Q6ZNF0 438 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 TPRA1Q86W33 373 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 FAM90A1Q86YD7 464 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 MKXQ8IYA7 352 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 Q8NFD4 153 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 OR51F2Q8NH61 342 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 ZNF671Q8TAW3 534 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 RAB2BQ8WUD1 216 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 HPS1Q92902 700 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 C12orf43Q96C57 262 aaKnown RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 SMURF1Q9HCE7 757 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 MYOZ1Q9NP98 299 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-215ENST00000550828 DUX4Q9UBX2 424 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 NPTNQ9Y639 398 aa11.3□□□□□ -0.6
ERBB3-215ENST00000550828 IFITM5A6NNB3 132 aa11.29□□□□□ -0.6
ERBB3-215ENST00000550828 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms