RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
PDE1B-207ENST00000550620 PIGQQ9BRB3 760 aa13.14□□□□□ -0.31
PDE1B-207ENST00000550620 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
PDE1B-207ENST00000550620 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
PDE1B-207ENST00000550620 CLEC1BQ9P126 229 aa13.14□□□□□ -0.31
PDE1B-207ENST00000550620 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 SP6Q3SY56 376 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 Q6ZSR3 168 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 OR8G5Q8NG78 346 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 FAM213BQ8TBF2 198 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 TOLLIPQ9H0E2 274 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 SH3BGRL3Q9H299 93 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 K7N7A8 449 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 C1QL1O75973 258 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 OPN1LWP04000 364 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 HEXBP07686 556 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 FKBP2P26885 142 aaKnown RBP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 AFF3P51826 1226 aaKnown RBP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 RPS23P62266 143 aaKnown RBP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 ZNF266Q14584 549 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 HEPN1Q6WQI6 88 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
PDE1B-207ENST00000550620 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 HDGFL3Q9Y3E1 203 aa13.13□□□□□ -0.31
PDE1B-207ENST00000550620 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 C5orf63A6NC05 138 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
PDE1B-207ENST00000550620 CD27P26842 260 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.12□□□□□ -0.31
PDE1B-207ENST00000550620 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 KMT5CQ86Y97 462 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 CCDC71LQ8N9Z2 235 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 SPSB1Q96BD6 273 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 FGF21Q9NSA1 209 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 RCL1Q9Y2P8 373 aaKnown RBP13.12□□□□□ -0.31
PDE1B-207ENST00000550620 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 PUS1Q9Y606 427 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDE1B-207ENST00000550620 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
PDE1B-207ENST00000550620 PCNX3Q9H6A9 2034 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 A0A1W2PR77 199 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 BTBD17A6NE02 478 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 ZNF814B7Z6K7 855 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 SFTPDP35247 375 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 HTR5AP47898 357 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 CSNK1A1P48729 337 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 MTCP1P56278 107 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 CLDN17P56750 224 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 FXYD4P59646 89 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 RSU1Q15404 277 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 EDARADDQ8WWZ3 215 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 ZNF501Q96CX3 271 aaPredicted RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 FAAP24Q9BTP7 215 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 SLC2A9Q9NRM0 540 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 NXT1Q9UKK6 140 aaKnown RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 NOSIPQ9Y314 301 aaKnown RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 HOXA5P20719 270 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 PPP1CCP36873 323 aaKnown RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 RPS10P46783 165 aaKnown RBP13.11□□□□□ -0.31
PDE1B-207ENST00000550620 NHLH2Q02577 135 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 YPEL4Q96NS1 127 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 LIME1Q9H400 295 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 SEMA5BQ9P283 1151 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 ZDHHC8Q9ULC8 765 aa13.11□□□□□ -0.31
PDE1B-207ENST00000550620 M0R135 149 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 PTGDSP41222 190 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 UCP3P55916 312 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDE1B-207ENST00000550620 CHAF1BQ13112 559 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 CNN3Q15417 329 aaKnown RBP13.1□□□□□ -0.31
PDE1B-207ENST00000550620 HIKESHIQ53FT3 197 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 PHLDA2Q53GA4 152 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 C10orf128Q5T292 105 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 FAM69BQ5VUD6 431 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 Q6ZS52 159 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 SPTSSAQ969W0 71 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
PDE1B-207ENST00000550620 ZNF799Q96GE5 643 aa13.1□□□□□ -0.31
PDE1B-207ENST00000550620 TDRD6O60522 2096 aaKnown RBP13.1□□□□□ -0.31
PDE1B-207ENST00000550620 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
PDE1B-207ENST00000550620 RBFOX3A6NFN3 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms