RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 RAD1O60671 282 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CTNSO60931 367 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 REM1O75628 298 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CNMDO75829 334 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 SLC22A5O76082 557 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 TTC4O95801 387 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 HSPD1P10809 573 aaKnown RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 ZNF823P16415 610 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 IGFBP3P17936 291 aaPredicted RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 BGNP21810 368 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 GALR1P47211 349 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CD151P48509 253 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 MTPNP58546 118 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 TAS2R39P59534 338 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CDK5Q00535 292 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 C2orf54Q08AI8 447 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 MAD2L1BPQ15013 274 aaPredicted RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 OR1Q1Q15612 314 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 MPV17L2Q567V2 206 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 AVPI1Q5T686 147 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 FAM27D1Q5T7N8 215 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 RTL4Q6ZR62 310 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 MDP1Q86V88 176 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 C12orf56Q8IXR9 622 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 ZNF786Q8N393 782 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CYB561D1Q8N8Q1 229 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 OR10Z1Q8NGY1 313 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 OR6K2Q8NGY2 324 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 SYNPRQ8TBG9 265 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 FLYWCH2Q96CP2 140 aaKnown RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CCDC124Q96CT7 223 aaKnown RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 RDH12Q96NR8 316 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CAMK2N2Q96S95 79 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 ULBP2Q9BZM5 246 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CLEC2DQ9UHP7 191 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 RAB23Q9ULC3 237 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 CFL2Q9Y281 166 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
HCFC2-204ENST00000550335 TSSC4Q9Y5U2 329 aaPredicted RBP3.78□□□□□ -1.8
HCFC2-204ENST00000550335 NAV1Q8NEY1 1877 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ATAD5Q96QE3 1844 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 RBBP6Q7Z6E9 1792 aaKnown RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 A0A0D9SFI3 127 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ANKRD20A5PA0PJZ0 165 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF705GA8MUZ8 300 aaPredicted RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 DNASE2O00115 360 aaPredicted RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 RAD51BO15315 384 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 POLR3GO15318 223 aaPredicted RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ALOX12BO75342 701 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 SERPINB7O75635 380 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 UPK1BO75841 260 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 SLC35G6P0C7Q6 338 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF806P0C7X5 589 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 CCL5P13501 91 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 MDKP21741 143 aaPredicted RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 GNRHRP30968 328 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 POLR2IP36954 125 aaKnown RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 KIR3DL2P43630 455 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 CRADDP78560 199 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 DYNC1I2Q13409 638 aaKnown RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 XRCC4Q13426 336 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 TNXAQ16473 311 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 OPN5Q6U736 354 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 EPGNQ6UW88 154 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 TIFABQ6ZNK6 161 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 SLC34A3Q8N130 599 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 DAW1Q8N136 415 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF645Q8N7E2 425 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 Q8N7P7 452 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 OR52P1PQ8NH57 321 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 OR10G6Q8NH81 332 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 C15orf40Q8WUR7 153 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ESR2Q92731 530 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF488Q96MN9 340 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 CIB1Q99828 191 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 DDX19AQ9NUU7 478 aaKnown RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 RBFOX1Q9NWB1 397 aaKnown RBP3.77□□□□□ -1.81
HCFC2-204ENST00000550335 MYH7P12883 1935 aa3.77□□□□□ -1.81
HCFC2-204ENST00000550335 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.76□□□□□ -1.81
HCFC2-204ENST00000550335 TRAV8-4A0A0B4J246 113 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 KRBOX1C9JBD0 128 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 VAPBO95292 243 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 P01737 135 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 IGHV1-8P0DP01 117 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 APLNRP35414 380 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 RGS6P49758 472 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 NAB1Q13506 487 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 MFSD14CQ5VZR4 134 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 SAXO2Q658L1 398 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 Q6ZSR6 202 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 LRRC8AQ8IWT6 810 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 ATPAF2Q8N5M1 289 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 CYB561A3Q8NBI2 242 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 DRAXINQ8NBI3 349 aaPredicted RBP3.76□□□□□ -1.81
HCFC2-204ENST00000550335 OR1J4Q8NGS1 313 aa3.76□□□□□ -1.81
HCFC2-204ENST00000550335 LGALS14Q8TCE9 139 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms