RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ADGRG5Q8IZF4 528 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 C11orf42Q8N5U0 333 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 KLHDC1Q8N7A1 406 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ASB17Q8WXJ9 295 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 DNAJC9Q8WXX5 260 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 RORBQ92753 470 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 OR8B4Q96RC9 309 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 CDCA4Q9BXL8 241 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 MROQ9BYG7 248 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 PBOV1Q9GZY1 135 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 YY1AP1Q9H869 796 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 MOB1AQ9H8S9 216 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 ZNF556Q9HAH1 456 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 SLC25A19Q9HC21 320 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 GPR84Q9NQS5 396 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 NUFIP1Q9UHK0 495 aaKnown RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 ENPP5Q9UJA9 477 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 FOXJ3Q9UPW0 622 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 POLDIP2Q9Y2S7 368 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 SIGLEC9Q9Y336 463 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 TMEM14AQ9Y6G1 99 aa6.18□□□□□ -1.42
NEK3-201ENST00000550331 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
NEK3-201ENST00000550331 FAM90A8PA6NJQ4 464 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 AQP12BA6NM10 295 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 DHRS7CA6NNS2 312 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PSMD9O00233 223 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 DLGAP1O14490 977 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 GNGT2O14610 69 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 CHST1O43916 411 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PSPNO60542 156 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 E2F6O75461 281 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 NRASP01111 189 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 RBP4P02753 201 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 VSIG10L2P0DP72 767 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 ANXA8P13928 327 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 FAHP16930 419 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PRDX2P32119 198 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 RIDAP52758 137 aaKnown RBP6.17□□□□□ -1.42
NEK3-201ENST00000550331 VAX1Q5SQQ9 334 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 ZNF684Q5T5D7 378 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TMEM42Q69YG0 159 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TMEM200BQ69YZ2 307 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TMEM179BQ7Z7N9 219 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 AQP12AQ8IXF9 295 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 Q8N2B8 174 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 CD177Q8N6Q3 437 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 BBS1Q8NFJ9 593 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 OR51E1Q8TCB6 317 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PIFOQ8TCI5 191 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 CANT1Q8WVQ1 401 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PPP1R14AQ96A00 147 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 CCDC124Q96CT7 223 aaKnown RBP6.17□□□□□ -1.42
NEK3-201ENST00000550331 FOXRED1Q96CU9 486 aaPredicted RBP6.17□□□□□ -1.42
NEK3-201ENST00000550331 NSL1Q96IY1 281 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TEAD3Q99594 435 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 NRIP2Q9BQI9 281 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 C1orf21Q9H246 121 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 HES4Q9HCC6 221 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 SERTAD4Q9NUC0 356 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TAS2R1Q9NYW7 299 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.17□□□□□ -1.42
NEK3-201ENST00000550331 TCF19Q9Y242 345 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 PIGLQ9Y2B2 252 aa6.17□□□□□ -1.42
NEK3-201ENST00000550331 TBL2Q9Y4P3 447 aaKnown RBP6.17□□□□□ -1.42
NEK3-201ENST00000550331 RYR2Q92736 4967 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 TENM3Q9P273 2699 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 PQLC2LA1A4F0 135 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 MEGF11A6BM72 1044 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 CCDC182A6NF36 153 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 C17orf98A8MV24 154 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 PRR32B1ATL7 298 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 LOC110117498-PIK3R3F6TDL0 507 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 SYNGR1O43759 233 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 XPNPEP2O43895 674 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 FBXO24O75426 580 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 SRSF10O75494 262 aaKnown RBP6.16□□□□□ -1.42
NEK3-201ENST00000550331 NXPH2O95156 264 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 TTRP02766 147 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 TK1P04183 234 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 MRPL3P09001 348 aaKnown RBP6.16□□□□□ -1.42
NEK3-201ENST00000550331 CCL3L1P16619 93 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 COX7A1P24310 79 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 MPZP25189 248 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 HAAOP46952 286 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 BMXP51813 675 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 HCCSP53701 268 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 LOXL3P58215 753 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 ACTR3P61158 418 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 MFGE8Q08431 387 aaPredicted RBP6.16□□□□□ -1.42
NEK3-201ENST00000550331 SNAPC1Q16533 368 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 DMRTC1Q5HYR2 192 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 CLVS2Q5SYC1 327 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 TMEM236Q5W0B7 351 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 FDX2Q6P4F2 183 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 Q6ZSR3 168 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 HS3ST5Q8IZT8 346 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 OR4S1Q8NGB4 309 aa6.16□□□□□ -1.42
NEK3-201ENST00000550331 OR4M1Q8NGD0 313 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms