RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
NUP188-211ENST00000550219 MRPL15Q9P015 296 aaKnown RBP11.17□□□□□ -0.62
NUP188-211ENST00000550219 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 PIGLQ9Y2B2 252 aa11.17□□□□□ -0.62
NUP188-211ENST00000550219 WNK2Q9Y3S1 2297 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 GABRPO00591 440 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 PIN1P1O15428 100 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 GPX5O75715 221 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 FAHP16930 419 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 CA6P23280 308 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 FGF9P31371 208 aaPredicted RBP11.16□□□□□ -0.62
NUP188-211ENST00000550219 PAX2Q02962 417 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 MAB21L1Q13394 359 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 INSL4Q14641 139 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ZNF181Q2M3W8 571 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ASPHD2Q6ICH7 369 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ZNF529Q6P280 563 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 UTS2BQ765I0 119 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 GPR141Q7Z602 305 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 PP6455Q8WZ26 134 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 TMEM106AQ96A25 262 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 UPRTQ96BW1 309 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 FGGYQ96C11 551 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 OR14A2Q96R54 314 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 UNKLQ9H9P5 680 aaKnown RBP11.16□□□□□ -0.62
NUP188-211ENST00000550219 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 ENPP5Q9UJA9 477 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 RHBDD3Q9Y3P4 386 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 TENM1Q9UKZ4 2725 aa11.16□□□□□ -0.62
NUP188-211ENST00000550219 GMDSO60547 372 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 ALX3O95076 343 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 CD2P06729 351 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
NUP188-211ENST00000550219 UCHL1P09936 223 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 GADD45AP24522 165 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
NUP188-211ENST00000550219 CD200P41217 278 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 SOX2P48431 317 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 FGF12P61328 243 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 SLC9A3R2Q15599 337 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 MPPED2Q15777 294 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 CLVS2Q5SYC1 327 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 SFRP4Q6FHJ7 346 aaPredicted RBP11.15□□□□□ -0.62
NUP188-211ENST00000550219 SHISA2Q6UWI4 295 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 GDPGP1Q6ZNW5 385 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 DCDC5Q6ZRR9 648 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 CEACAM19Q7Z692 300 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 ANKRD13BQ86YJ7 626 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 SERPINA12Q8IW75 414 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 FTMTQ8N4E7 242 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
NUP188-211ENST00000550219 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 CHST5Q9GZS9 411 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 SLC22A4Q9H015 551 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 OR51E2Q9H255 320 aa11.15□□□□□ -0.62
NUP188-211ENST00000550219 PPIL3Q9H2H8 161 aaKnown RBP11.15□□□□□ -0.62
NUP188-211ENST00000550219 A6NIN4 97 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 A6NLC8 198 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 ANKRD30BLA7E2S9 258 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 C22orf46C9J442 243 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
NUP188-211ENST00000550219 ENSAO43768 121 aaKnown RBP11.14□□□□□ -0.63
NUP188-211ENST00000550219 PLATP00750 562 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 ZNF20P17024 532 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
NUP188-211ENST00000550219 FSTP19883 344 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 OMGP23515 440 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 GATA4P43694 442 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 TIMM50Q3ZCQ8 353 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
NUP188-211ENST00000550219 RUSC1-AS1Q66K80 236 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 OR5D14Q8NGL3 314 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 PCGF1Q9BSM1 259 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 PPP1R3EQ9H7J1 279 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 FN3KRPQ9HA64 309 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 PLEKHA1Q9HB21 404 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 ABCB9Q9NP78 766 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 NOX4Q9NPH5 578 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 SSR3Q9UNL2 185 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 NOP16Q9Y3C1 178 aaKnown RBP11.14□□□□□ -0.63
NUP188-211ENST00000550219 MPC1Q9Y5U8 109 aa11.14□□□□□ -0.63
NUP188-211ENST00000550219 IGKV1-9A0A0C4DH69 117 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 ANKRD61A6NGH8 418 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 NRASP01111 189 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
NUP188-211ENST00000550219 CPT2P23786 658 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 PRDX4Q13162 271 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 UBE2V2Q15819 145 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 DEFB112Q30KQ8 113 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms