RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 C1orf147Q96MC9 270 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 TECTBQ96PL2 329 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 KCNK15Q9H427 330 aa17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 ZNF107Q9UII5 783 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 MRPS28Q9Y2Q9 187 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-204ENST00000548823 hCG_38984A0A1B0GV85 526 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 SERPINA5P05154 406 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 CHRM2P08172 466 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 IGHV4-31P0DP07 118 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 NAT2P11245 290 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 SLC25A16P16260 332 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 FAHP16930 419 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 ZNF16P17020 682 aaPredicted RBP17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 PRKACBP22694 351 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 RAB1AP62820 205 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 PLP2Q04941 152 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 UNC119Q13432 240 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 UBE2V2Q15819 145 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 RSBN1Q5VWQ0 802 aaPredicted RBP17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 AWAT2Q6E213 333 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 CLEC2AQ6UVW9 174 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 TFAP2EQ6VUC0 442 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 BEND4Q6ZU67 534 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 GPX8Q8TED1 209 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 OPA3Q9H6K4 179 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 C12orf49Q9H741 205 aa17.04■□□□□ 0.32
CTDSP2-204ENST00000548823 LOC100509620A0A075B734 347 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 A0A096LPE4 126 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 A0A1W2PPZ6 126 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 HMX3A6NHT5 357 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 INMT-MINDY4F8WBC2 141 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 HLA-HP01893 362 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 MELTFP08582 738 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 CSF1P09603 554 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 PSMB1P20618 241 aaKnown RBP17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 TGFBR3Q03167 851 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 CNN3Q15417 329 aaKnown RBP17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 KISS1Q15726 138 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 RNASE12Q5GAN4 147 aaKnown RBP17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 FAM120AOSQ5T036 256 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 ALKBH2Q6NS38 261 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 CRIP3Q6Q6R5 217 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 IL17RELQ6ZVW7 336 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 AKAP14Q86UN6 197 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 DTX2Q86UW9 622 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 UPRTQ96BW1 309 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 CACNG6Q9BXT2 260 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 HRASLSQ9HDD0 168 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 NGBQ9NPG2 151 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 KLK11Q9UBX7 282 aa17.03■□□□□ 0.32
CTDSP2-204ENST00000548823 RAB27BO00194 218 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 TCRBP04435 133 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 ACKR3P25106 362 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 STOMP27105 288 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 ACTBP60709 375 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 ACTG1P63261 375 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 FAM3AP98173 230 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 CLVS2Q5SYC1 327 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 GLIPR1L1Q6UWM5 242 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 BTN2A1Q7KYR7 527 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 OR2AE1Q8NHA4 323 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 APOBEC3DQ96AK3 386 aaPredicted RBP17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 POM121L2Q96KW2 1035 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 NKX3-1Q99801 234 aaPredicted RBP17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 KCNS2Q9ULS6 477 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 CADP27708 2225 aa17.02■□□□□ 0.32
CTDSP2-204ENST00000548823 J3QW42 95 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 LPLP06858 475 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 CD79AP11912 226 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 HNF1AP20823 631 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 FAUP35544 74 aaKnown RBP17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 PTGFRP43088 359 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 TBRG1Q3YBR2 411 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 Q6ZT83 130 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 DRAXINQ8NBI3 349 aaPredicted RBP17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 STEAP2Q8NFT2 490 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 AQP3Q92482 292 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 HPS1Q92902 700 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 GCDHQ92947 438 aaPredicted RBP17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 GPER1Q99527 375 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 NOX3Q9HBY0 568 aa17.02■□□□□ 0.31
CTDSP2-204ENST00000548823 MGAM2Q2M2H8 2515 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 A0A0B4J293 547 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF503-AS2A6NEH8 195 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 DHFRP00374 187 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 EGR1P18146 543 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 OR3A4PP47883 348 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF92Q03936 586 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 TATDN3Q17R31 274 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 GSG1Q2KHT4 349 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF260Q3ZCT1 412 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 OR10K2Q6IF99 312 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 GLCCI1Q86VQ1 547 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF101Q8IZC7 436 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 C1orf162Q8NEQ5 155 aaPredicted RBP17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 SGMS2Q8NHU3 365 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 S100PBPQ96BU1 408 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 SEH1LQ96EE3 360 aa17.01■□□□□ 0.31
CTDSP2-204ENST00000548823 ZNF75AQ96N20 296 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms