RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 HFEQ30201 348 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CEACAM21Q3KPI0 293 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 Q499Y3 187 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 ARMCX4Q5H9R4 360 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 DMRTC1Q5HYR2 192 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 SHEQ5VZ18 495 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 ASPHD2Q6ICH7 369 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PRSS57Q6UWY2 283 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 DNM1P46Q6ZS02 220 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MOB3CQ70IA8 216 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 UTS2BQ765I0 119 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MOGAT3Q86VF5 341 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 OR1M1Q8NGA1 313 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TRMT10AQ8TBZ6 339 aaKnown RBP5.33□□□□□ -1.56
PRKDC-211ENST00000546304 Q8TCH9 128 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 RDH5Q92781 318 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 YIPF5Q969M3 257 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MUL1Q969V5 352 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 FGGYQ96C11 551 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 DERL3Q96Q80 235 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 HIST1H2AAQ96QV6 131 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PIMREGQ9BSJ6 248 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TLNRD1Q9H1K6 362 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MEGF9Q9H1U4 602 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 FN3KRPQ9HA64 309 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 UFSP2Q9NUQ7 469 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 DCAF16Q9NXF7 216 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 TAS2R4Q9NYW5 299 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 CKLFQ9UBR5 152 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 PPP1R3CQ9UQK1 317 aa5.33□□□□□ -1.56
PRKDC-211ENST00000546304 MALRD1Q5VYJ5 2156 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 IGHV4-30-2A0A087WSY4 118 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TRBV5-7A0A0A0MS05 114 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 IGKV1-9A0A0C4DH69 117 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 LRRC30A6NM36 301 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF732B4DXR9 585 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 J3QT63 122 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 IFNL4K9M1U5 179 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 NDUFS8O00217 210 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 SC5DO75845 299 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 MPIG6BO95866 241 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 GRPP07492 148 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 HCKP08631 526 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 IRF2P14316 349 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 RAB3AP20336 220 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 PRKACBP22694 351 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 GIFP27352 417 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 CRYBB2P43320 205 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 DSCR9P59020 149 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 IL13RA1P78552 427 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 RIN1Q13671 783 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 INSL4Q14641 139 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TRAM1Q15629 374 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 UBE2V2Q15819 145 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF181Q2M3W8 571 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TM4SF20Q53R12 229 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM177Q53S58 311 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 FAM27D1Q5T7N8 215 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 SYT6Q5T7P8 510 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF529Q6P280 563 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 HAGHLQ6PII5 290 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 WDR82Q6UXN9 313 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 LHFPL2Q6ZUX7 228 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF573Q86YE8 665 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TGIF2LYQ8IUE0 185 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 SERPINA12Q8IW75 414 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 C1orf87Q8N0U7 546 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 MS4A15Q8N5U1 240 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 DNAAF1Q8NEP3 725 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 WFDC11Q8NEX6 87 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 OR5A2Q8NGI9 324 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 OR51A2Q8NGJ7 313 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 OR5D14Q8NGL3 314 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 OR11L1Q8NGX0 322 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ZNF420Q8TAQ5 688 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 C10orf105Q8TEF2 133 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 CCL17Q92583 94 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM203Q969S6 136 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ERGIC1Q969X5 290 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 BORCS8Q96FH0 119 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 CPNE2Q96FN4 548 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TIMD4Q96H15 378 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 RNF170Q96K19 258 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 Q96MF0 132 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 MRPS26Q9BYN8 205 aaKnown RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 BPESC1Q9GZL8 116 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 NEK6Q9HC98 313 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 NOX4Q9NPH5 578 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TMEM106BQ9NUM4 274 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 C1orf123Q9NWV4 160 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 TREM2Q9NZC2 230 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 ITGB1BP2Q9UKP3 347 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 SLC7A11Q9UPY5 501 aa5.32□□□□□ -1.56
PRKDC-211ENST00000546304 YLPM1P49750 1951 aaKnown RBP5.32□□□□□ -1.56
PRKDC-211ENST00000546304 SVEP1Q4LDE5 3571 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 IGKV1-27A0A075B6S5 117 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 TRAV8-7A0A075B6U6 113 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 FAM230AA0A1W2PPH8 454 aa5.31□□□□□ -1.56
PRKDC-211ENST00000546304 A0A1W2PPK0 400 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms