RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR7C2O60412 319 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 MT-CO3P00414 261 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 PTHLHP12272 177 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 ZFP36L2P47974 494 aaKnown RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 CSRP3P50461 194 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 FABP6P51161 128 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 WFDC8Q8IUA0 241 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 LURAP1Q96LR2 239 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 GNRHR2Q96P88 292 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 MYOZ1Q9NP98 299 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 ADAM20O43506 726 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 PTP4A3O75365 173 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 TLE1Q04724 770 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 CMBLQ96DG6 245 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 MBD1Q9UIS9 605 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 TTC3P53804 2025 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 ANKRD31Q8N7Z5 1873 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 NUMA1Q14980 2115 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 TCRBV16S1A1N1A0A5B0 115 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SIGIRRQ6IA17 410 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 C17orf78Q8N4C9 275 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 FAAP24Q9BTP7 215 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 V9GYS6 101 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 MOSPD3O75425 235 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 OR5G3P0C626 314 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SLC25A4P12235 298 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 IL24Q13007 206 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 LRRC10Q5BKY1 277 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SARGQ9BW04 601 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 SLC35B3Q9H1N7 401 aa11.11□□□□□ -0.63
COL4A6-209ENST00000545689 RGPD3A6NKT7 1758 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-209ENST00000545689 A0A1B0GTH9 108 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 GNB1P62873 340 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 C6orf201Q7Z4U5 140 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 OR11G2Q8NGC1 345 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 LSM2Q9Y333 95 aaKnown RBP11.1□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF17P17021 662 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 PPP1CAP62136 330 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 PTPMT1Q8WUK0 201 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-209ENST00000545689 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-209ENST00000545689 STARD10Q9Y365 291 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 COL4A5P29400 1685 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 CYTIPO60759 359 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 FGF2P09038 288 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 PEBP1P30086 187 aaKnown RBP11.1□□□□□ -0.63
COL4A6-209ENST00000545689 CEACAM6P40199 344 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 RFC3P40938 356 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 SLC38A11Q08AI6 406 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 LINC00596Q86U02 117 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 GPR87Q9BY21 358 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 ST6GALNAC2Q9UJ37 374 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 OR2C3Q8N628 320 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 OR2Y1Q8NGV0 311 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 FOSL1P15407 271 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 PPP1CBP62140 327 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 ZP4Q12836 540 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 GPR137Q96N19 417 aa11.1□□□□□ -0.63
COL4A6-209ENST00000545689 OR5H15A6NDH6 313 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 NDUFB3O43676 98 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 CSF2RBP32927 897 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 SELENOPP49908 381 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-209ENST00000545689 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 CXXC4Q9H2H0 198 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 WDR54Q9H977 334 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 CST7O76096 145 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 PNLIPP16233 465 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 COL19A1Q14993 1142 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 OR2T2Q6IF00 324 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 TMEM91Q6ZNR0 172 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 NECAP1Q8NC96 275 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 DEFB108BQ8NET1 73 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 SLC36A1Q7Z2H8 476 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 TM4SF19Q96DZ7 209 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 PLA2G10O15496 165 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 LPAR6P43657 344 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 ZNF79Q15937 498 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 ERRFI1Q9UJM3 462 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-209ENST00000545689 PCDHGA9Q9Y5G4 932 aaKnown RBP11.09□□□□□ -0.63
COL4A6-209ENST00000545689 SCN4AP35499 1836 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 SCO1O75880 301 aa11.09□□□□□ -0.63
COL4A6-209ENST00000545689 M0R1X1 148 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms