RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 LINC00336Q6ZUF6 198 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 SPAG16Q8N0X2 631 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 MREGQ8N565 214 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 ARRDC1Q8N5I2 433 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 C12orf29Q8N999 325 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 ST6GALNAC3Q8NDV1 305 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 TMEM104Q8NE00 496 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 CCDC54Q8NEL0 328 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 LKAAEAR1Q8TD35 194 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 MCOLN3Q8TDD5 553 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 IL22RA2Q969J5 263 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 TMIGD2Q96BF3 282 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 LRRC39Q96DD0 335 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 SMIM10Q96HG1 83 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 IMMP1LQ96LU5 166 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 TSSK3Q96PN8 268 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 OR2M2Q96R28 347 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 CHID1Q9BWS9 393 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 GAL3ST2Q9H3Q3 398 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 LZTFL1Q9NQ48 299 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF629Q9UEG4 869 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-222ENST00000545308 HS3ST2Q9Y278 367 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 BZW2Q9Y6E2 419 aaKnown RBP2.8□□□□□ -1.96
SNHG1-222ENST00000545308 KIF25-AS1Q9Y6Z4 181 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 CNTRLQ7Z7A1 2325 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 CCDC88CQ9P219 2028 aa2.8□□□□□ -1.96
SNHG1-222ENST00000545308 MTORP42345 2549 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 SLC22A20A6NK97 555 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 OR5K4A6NMS3 321 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 H3BQV1 296 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 H7C0C1 242 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 NME4O00746 187 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 XKRYO14609 159 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 HAT1O14929 419 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 SUPT3HO75486 399 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ASS1P00966 412 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 IGLV3-27P01718 113 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 BGLAPP02818 100 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 TACSTD2P09758 323 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 CCDC172P0C7W6 258 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 CCL4P13236 92 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF19P17023 458 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 RCC1P18754 421 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 RAB4AP20338 218 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 SLC26A3P40879 764 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 CSNK1DP48730 415 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 CCNG1P51959 295 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 CRISP3P54108 245 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 INCA1Q0VD86 236 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 C16orf72Q14CZ0 275 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 RSPO1Q2MKA7 263 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 TTLL9Q3SXZ7 439 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 PTPN20Q4JDL3 420 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 FBXO48Q5FWF7 155 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 COA6Q5JTJ3 125 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ADNP2Q6IQ32 1131 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 NPSR1Q6W5P4 371 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF493Q6ZR52 646 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 MBOAT2Q6ZWT7 520 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 STRADAQ7RTN6 431 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 SETD3Q86TU7 594 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 OAFQ86UD1 273 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF547Q8IVP9 402 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 C12orf56Q8IXR9 622 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ASCC1Q8N9N2 400 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 OR2L5Q8NG80 312 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ACTRT1Q8TDG2 376 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 TCP10LQ8TDR4 215 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 PDCD6IPQ8WUM4 868 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 RPEQ96AT9 228 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 SLC35E1Q96K37 410 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 MICU1Q9BPX6 476 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ULBP1Q9BZM6 244 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ING2Q9H160 280 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 MRM3Q9HC36 420 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ABCB10Q9NRK6 738 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 FAM49BQ9NUQ9 324 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 STMN3Q9NZ72 180 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 PCYOX1Q9UHG3 505 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 FARSAQ9Y285 508 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 STK38LQ9Y2H1 464 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 FADS3Q9Y5Q0 445 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 KCNE3Q9Y6H6 103 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ANKRD36A6QL64 1941 aa2.79□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF106Q9H2Y7 1883 aaKnown RBP2.79□□□□□ -1.96
SNHG1-222ENST00000545308 LRP4O75096 1905 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 CCDC168Q8NDH2 2452 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 TRAV6A0A075B6T7 132 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 A0A1W2PQ67 120 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 ERI3O43414 337 aaKnown RBP2.78□□□□□ -1.96
SNHG1-222ENST00000545308 XRCC2O43543 280 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 HSBP1O75506 76 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 ACTL6AO96019 429 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 PAHP00439 452 aa2.78□□□□□ -1.96
SNHG1-222ENST00000545308 IGKV3-15P01624 115 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms