RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 COMMD4Q9H0A8 199 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 FAM234AQ9H0X4 552 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 HES4Q9HCC6 221 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 FRRS1LQ9P0K9 344 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF222Q9UK12 451 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 IGHV1-69DA0A0B4J2H0 117 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 hCG_1809904A0A1W2PP81 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1W2PPE2 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1W2PQ09 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1W2PR64 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1W2PRV1 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 A6NIN4 97 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 RFPL4AA6NLU0 287 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 RFPL4AL1F8VTS6 287 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 SYNGR1O43759 233 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 IGHV1-69P01742 117 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 MT-ND2P03891 347 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 SFTPBP07988 381 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 AMY2BP19961 511 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 EEF1B2P24534 225 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 PRDX2P32119 198 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 ERVK11-1P61568 191 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 FOXL1Q12952 345 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 RCN1Q15293 331 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 UBE2V2Q15819 145 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 DGUOKQ16854 277 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 CCDC58Q4VC31 144 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF691Q5VV52 312 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 TMPRSS11AQ6ZMR5 421 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 VMO1Q7Z5L0 202 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 LHFPL3Q86UP9 236 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 BCL6BQ8N143 479 aaPredicted RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 DHRSXQ8N5I4 330 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 TMEM185AQ8NFB2 350 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 OR5D13Q8NGL4 314 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 OR13C3Q8NGS6 347 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 TRMT10AQ8TBZ6 339 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 CYGBQ8WWM9 190 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 CEP19Q96LK0 163 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 METTL8Q9H825 291 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 UNKLQ9H9P5 680 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 FGF20Q9NP95 211 aaPredicted RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 CHCHD3Q9NX63 227 aaKnown RBP9.74□□□□□ -0.85
HDAC4-216ENST00000544989 GLS2Q9UI32 602 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 POMT1Q9Y6A1 747 aa9.74□□□□□ -0.85
HDAC4-216ENST00000544989 IGHV3OR16-10A0A075B7F0 116 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1B0GW55 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 OR4C45A6NMZ5 311 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 H0YAE9 185 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 FCN3O75636 299 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 ALX3O95076 343 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 CHRM2P08172 466 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L2P0CJ85 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L3P0CJ86 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L4P0CJ87 422 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L5P0CJ88 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L6P0CJ89 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L7P0CJ90 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 ATF1P18846 271 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 MYL12AP19105 171 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 MTCP1P56278 107 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 RPL15P61313 204 aaKnown RBP9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DMRTC1Q5HYR2 192 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4L9Q6RFH8 374 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-216ENST00000544989 BRD3OSQ6XYD6 125 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 ANGPTL5Q86XS5 388 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 CALHM1Q8IU99 346 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 RDH10Q8IZV5 341 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 ZNRF1Q8ND25 227 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 OR52I1Q8NGK6 324 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 OR5D14Q8NGL3 314 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 OR5AK2Q8NH90 309 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 SSMEM1Q8WWF3 244 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 LHX4Q969G2 390 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-216ENST00000544989 FGGYQ96C11 551 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF48Q96MX3 618 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-216ENST00000544989 OPALINQ96PE5 141 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 AMBNQ9NP70 447 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 DUX4Q9UBX2 424 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 MYRFQ9Y2G1 1151 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 EXOSC1Q9Y3B2 195 aaKnown RBP9.73□□□□□ -0.85
HDAC4-216ENST00000544989 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 MAB21L2Q9Y586 359 aa9.73□□□□□ -0.85
HDAC4-216ENST00000544989 HAX1O00165 279 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 HKR1P10072 659 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 SELLP14151 372 aa9.72□□□□□ -0.85
HDAC4-216ENST00000544989 AZGP1P25311 298 aaKnown RBP9.72□□□□□ -0.85
HDAC4-216ENST00000544989 NANOS3P60323 173 aaKnown RBP9.72□□□□□ -0.85
HDAC4-216ENST00000544989 RPL31P62899 125 aaKnown RBP9.72□□□□□ -0.85
HDAC4-216ENST00000544989 ELF3P78545 371 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-216ENST00000544989 SLC9A3R2Q15599 337 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms