RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 MTCH1Q9NZJ7 389 aa14.29□□□□□ -0.12
RABGGTA-203ENST00000543002 NLKQ9UBE8 527 aa14.29□□□□□ -0.12
RABGGTA-203ENST00000543002 A0A087WXM4 84 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 B4DSR2 109 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 INMTO95050 263 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 ZP1P60852 638 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 SMIM21Q3B7S5 101 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 STUMQ69YW2 141 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 ACP7Q6ZNF0 438 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 TMEM91Q6ZNR0 172 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 NLRC3Q7RTR2 1065 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 OR8B3Q8NGG8 313 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 SLAMF9Q96A28 289 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 CEP19Q96LK0 163 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 OR8B2Q96RD0 313 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 NR1H4Q96RI1 486 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 SNTG1Q9NSN8 517 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 NDUFB11Q9NX14 153 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 KAAG1Q9UBP8 84 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 ABCA2Q9BZC7 2435 aa14.28□□□□□ -0.12
RABGGTA-203ENST00000543002 CCRL2O00421 344 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 ADAM20O43506 726 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 SPRY1O43609 319 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 RGS9O75916 674 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 NXPH2O95156 264 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 UCHL1P09936 223 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 ZNF16P17020 682 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 GP2P55259 537 aaKnown RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 SEC61A1P61619 476 aaKnown RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 FABP5Q01469 135 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 NEDD8Q15843 81 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 SYT6Q5T7P8 510 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 ATPAF1Q5TC12 328 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 DDI2Q5TDH0 399 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 SATL1Q86VE3 508 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 Q8IYB0 196 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 ZSCAN4Q8NAM6 433 aaPredicted RBP14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 OR5T2Q8NGG2 359 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 OR5D18Q8NGL1 313 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 OR51F2Q8NH61 342 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 ANGPTL6Q8NI99 470 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 PHYHIPQ92561 330 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 GPER1Q99527 375 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 DNTTIP1Q9H147 329 aa14.27□□□□□ -0.12
RABGGTA-203ENST00000543002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■□□□ 14.2
RABGGTA-203ENST00000543002 TLN2Q9Y4G6 2542 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 IGKV1-12A0A0C4DH73 117 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 MAGEA13PA6NCF6 341 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 OR2AT4A6NND4 320 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 A8MXK9 166 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 F8VVB4 439 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 F8VWA3 439 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 TRAPPC2LH3BP13 241 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 GABRPO00591 440 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 FOXH1O75593 365 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 TGFAP01135 160 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 IGKV1D-12P01611 117 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 MSMBP08118 114 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 PSG2P11465 335 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 AMY2BP19961 511 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 ZNF93P35789 620 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 PITPNBP48739 271 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 HSD17B12Q53GQ0 312 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 ESCO2Q56NI9 601 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 CDH26Q8IXH8 852 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 BATF2Q8N1L9 274 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 CCL13Q99616 98 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 PPIL3Q9H2H8 161 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 TCF7L1Q9HCS4 588 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 CTSZQ9UBR2 303 aa14.26□□□□□ -0.13
RABGGTA-203ENST00000543002 MEGF11A6BM72 1044 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 TRIM64CA6NLI5 447 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 TMPRSS2O15393 492 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 KDM4BO94953 1096 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 MAS1P04201 325 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 TMEM225BP0DP42 221 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 SRMP19623 302 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 BCL3P20749 454 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 NPBWR2P48146 333 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 DVL1P1P54792 670 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 FAM166AQ6J272 317 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 CD200R1LQ6Q8B3 271 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 ZNF788Q6ZQV5 615 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 SLC36A1Q7Z2H8 476 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 PXT1Q8NFP0 134 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 MUL1Q969V5 352 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 SSBP3Q9BWW4 388 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 RHOFQ9HBH0 211 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 LPAR2Q9HBW0 351 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 SMURF1Q9HCE7 757 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 VCX3AQ9NNX9 186 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 ZNF222Q9UK12 451 aa14.25□□□□□ -0.13
RABGGTA-203ENST00000543002 IGKV1D-17A0A075B6S4 117 aa14.24□□□□□ -0.13
RABGGTA-203ENST00000543002 TRDV1A0A1B0GX56 115 aa14.24□□□□□ -0.13
RABGGTA-203ENST00000543002 NKX6-3A6NJ46 265 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms