RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 MUC1P15941 1255 aaPredicted RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 SERPINF1P36955 418 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 RRADP55042 308 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 ACER2Q5QJU3 275 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 ETV3LQ6ZN32 361 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 M1APQ8TC57 530 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 CT55Q8WUE5 264 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 CLCC1Q96S66 551 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 TCEAL7Q9BRU2 100 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 FOXD3Q9UJU5 478 aaPredicted RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 LOXL2Q9Y4K0 774 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 A0A0B4J2A0 478 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 LRRC3CA6NJW4 275 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 MSTNO14793 375 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 GLI4P10075 376 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 AMY2BP19961 511 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 GRB2P62993 217 aaKnown RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 RNF212Q495C1 297 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 GGNQ86UU5 652 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 OR13G1Q8NGZ3 307 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 EGLN1Q9GZT9 426 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 MYOZ1Q9NP98 299 aaPredicted RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 SHPKQ9UHJ6 478 aa12.88□□□□□ -0.35
DDX55-209ENST00000542286 MCTS1Q9ULC4 181 aaKnown RBP12.88□□□□□ -0.35
DDX55-209ENST00000542286 IGKV1-27A0A075B6S5 117 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 F8VVB4 439 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 F8VWA3 439 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 MFNGO00587 321 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CBR3O75828 277 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 KNG1P01042 644 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 P04436 131 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CCL2P13500 99 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 ZNF32P17041 273 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CCL1P22362 96 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 AKR1C3P42330 323 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 SNU13P55769 128 aaKnown RBP12.87□□□□□ -0.35
DDX55-209ENST00000542286 CARD18P57730 90 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 RAC1P63000 192 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 MST1LQ2TV78 715 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 PIGQQ9BRB3 760 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
DDX55-209ENST00000542286 DHRS3O75911 302 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CER1O95813 267 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 LCATP04180 440 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 TMEM225BP0DP42 221 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 PRF1P14222 555 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 F2RL1P55085 397 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
DDX55-209ENST00000542286 TAF9Q16594 264 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CSNK2A3Q8NEV1 391 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 OR10D3Q8NH80 312 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 SSC4DQ8WTU2 575 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 HIST1H2BAQ96A08 127 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 PADI1Q9ULC6 663 aa12.87□□□□□ -0.35
DDX55-209ENST00000542286 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 A0A1W2PNU3 283 aaPredicted RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 GDF1P27539 372 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 OPRM1P35372 400 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 FOXG1P55316 489 aaPredicted RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 ZNF561Q8N587 486 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PNLDC1Q8NA58 520 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 MITD1Q8WV92 249 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 SLC2A8Q9NY64 477 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PLA2G3Q9NZ20 509 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 EHFQ9NZC4 300 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 METTL1Q9UBP6 276 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 WRBO00258 174 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 MTCP1P56278 107 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 LILRB2Q8N423 598 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PHB2Q99623 299 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 P4HTMQ9NXG6 502 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 FOXJ2Q9P0K8 574 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PRR14LQ5THK1 2151 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 A0A096LPE4 126 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 LOC102725191A0A1B0GVB3 256 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 DHRS7CA6NNS2 312 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms