RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 LYZL2Q7Z4W2 148 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 PQLC2LA1A4F0 135 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 NPIPA2E9PIF3 369 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 NPIPA3F8WFD2 350 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 TNFSF12O43508 249 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 CST4P01036 141 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 RPS2P15880 293 aaKnown RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 SULT1A2P50226 295 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 DVL1P1P54792 670 aaPredicted RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 GUK1Q16774 197 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 PLXDC2Q6UX71 529 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 NOXO1Q8NFA2 376 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 AKR7LQ8NHP1 331 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 EMG1Q92979 244 aaKnown RBP13.42□□□□□ -0.26
CNOT9-208ENST00000542068 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 DKKL1Q9UK85 242 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
CNOT9-208ENST00000542068 UMAD1C9J7I0 102 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 CCNOP22674 350 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 TAS2R46P59540 309 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 NHLH2Q02577 135 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 ACTBL2Q562R1 376 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 THEM4Q5T1C6 240 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
CNOT9-208ENST00000542068 PADI1Q9ULC6 663 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 URGCP-MRPS24S4R325 110 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 GPR37O15354 613 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 TLX3O43711 291 aaPredicted RBP13.41□□□□□ -0.26
CNOT9-208ENST00000542068 OR5AC1P0C628 307 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 C5orf24Q7Z6I8 188 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 YRDCQ86U90 279 aaKnown RBP13.41□□□□□ -0.26
CNOT9-208ENST00000542068 MIOXQ9UGB7 285 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 MMP24Q9Y5R2 645 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 TMEM131Q92545 1883 aa13.41□□□□□ -0.26
CNOT9-208ENST00000542068 ATXN7O15265 892 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 IFNA4P05014 189 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 JMJD7P0C870 316 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 OR5H8P0DN80 308 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 FAM180AQ6UWF9 173 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF441Q8N8Z8 693 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 OR11L1Q8NGX0 322 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 SPACA9Q96E40 222 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 OCSTAMPQ9BR26 566 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 GSN-AS1Q9NRJ2 163 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 C19orf25Q9UFG5 118 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 EML6Q6ZMW3 1958 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 CD5P06127 495 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 MTCP1P56278 107 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 PLPPR5Q32ZL2 321 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 WDR74Q6RFH5 385 aaPredicted RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 TCEAL3Q969E4 200 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 LYZL4Q96KX0 146 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 LIME1Q9H400 295 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 WFDC1Q9HC57 220 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 CSNK1A1P48729 337 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 DOK3Q7L591 496 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF565Q8N9K5 539 aa13.4□□□□□ -0.26
CNOT9-208ENST00000542068 ZNF385AQ96PM9 386 aaKnown RBP13.4□□□□□ -0.26
CNOT9-208ENST00000542068 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 TP53I11O14683 189 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 MBPP02686 304 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 CCL3P10147 92 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 PPP1CCP36873 323 aaKnown RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 IFI44Q8TCB0 444 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 RARRES2Q99969 163 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 JTBO76095 146 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 EPHA8P29322 1005 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 GSK3AP49840 483 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 ZP4Q12836 540 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 NFAM1Q8NET5 270 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 OR14K1Q8NGZ2 314 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
CNOT9-208ENST00000542068 MRPL13Q9BYD1 178 aaKnown RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 FAM212BQ9NTI7 297 aaPredicted RBP13.39□□□□□ -0.27
CNOT9-208ENST00000542068 ZNF727A8MUV8 499 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 ACKR3P25106 362 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 SRYQ05066 204 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 SHBQ15464 509 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 PDZD11Q5EBL8 140 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 RPUSD3Q6P087 351 aaKnown RBP13.38□□□□□ -0.27
CNOT9-208ENST00000542068 SKA3Q8IX90 412 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 ABHD14AQ9BUJ0 271 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 MAGT1Q9H0U3 335 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 KCNJ16Q9NPI9 418 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 C9J4A7 227 aa13.38□□□□□ -0.27
CNOT9-208ENST00000542068 TNFSF11O14788 317 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms