RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 FAM98BQ52LJ0 330 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 ASRGL1Q7L266 308 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 PIGWQ7Z7B1 504 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 CHID1Q9BWS9 393 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 C1orf21Q9H246 121 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 ENPP5Q9UJA9 477 aa12.42□□□□□ -0.42
CLSTN3-213ENST00000541953 TENM3Q9P273 2699 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 H3BSH0 61 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 DHRS3O75911 302 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 CST1P01037 141 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 RAP2AP10114 183 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 OSMP13725 252 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 MPZP25189 248 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 ROM1Q03395 351 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 SLC35D3Q5M8T2 416 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 ZNF684Q5T5D7 378 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 C10orf99Q6UWK7 81 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 TPRX1Q8N7U7 411 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 OR14K1Q8NGZ2 314 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 TRMT10AQ8TBZ6 339 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 APOL4Q9BPW4 351 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 YIPF3Q9GZM5 350 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 ARL2BPQ9Y2Y0 163 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 HILPDAQ9Y5L2 63 aa12.41□□□□□ -0.42
CLSTN3-213ENST00000541953 IGKV1-27A0A075B6S5 117 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 TMEM82A0PJX8 343 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 K7N7A8 449 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 MMP23AO75900 390 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 INMTO95050 263 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 ZNF728P0DKX0 622 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 ZNF679Q8IYX0 411 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 OR4F17Q8NGA8 305 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 OR11H6Q8NGC7 330 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 RPS4Y2Q8TD47 263 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 CANT1Q8WVQ1 401 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 OR4F4Q96R69 305 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 MUC13Q9H3R2 512 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 SLC25A19Q9HC21 320 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 GTF2A1LQ9UNN4 478 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 TBL2Q9Y4P3 447 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 V9GYS6 101 aa12.4□□□□□ -0.42
CLSTN3-213ENST00000541953 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 GSC2O15499 205 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 PRKYO43930 277 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 ATP6V1B1P15313 513 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 CD24P25063 80 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 VDAC2P45880 294 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 EDDM3BP56851 147 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 CD83Q01151 205 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 EMX1Q04741 257 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 CLVS2Q5SYC1 327 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 ZNF573Q86YE8 665 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 WFDC9Q8NEX5 89 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 MALSU1Q96EH3 234 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 CADM1Q9BY67 442 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 MROQ9BYG7 248 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 ABCB10Q9NRK6 738 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 MTCH1Q9NZJ7 389 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 SLC22A13Q9Y226 551 aa12.39□□□□□ -0.43
CLSTN3-213ENST00000541953 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 IGHA1P01876 353 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 HMGN1P05114 100 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 RIDAP52758 137 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 ESRRGP62508 458 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 GNGT1P63211 74 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 DYNC1I2Q13409 638 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 EDDM3AQ14507 147 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 SSX6Q7RTT6 188 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 OR52N4Q8NGI2 321 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 CHST6Q9GZX3 395 aa12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 MRM2Q9UI43 246 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-213ENST00000541953 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 A0A1W2PR64 198 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 FAM90A22PA8MWA6 464 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 LOC110117498-PIK3R3F6TDL0 507 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 F2RL2O00254 374 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 DLGAP1O14490 977 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 DCTN3O75935 186 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 CD33P20138 364 aa12.37□□□□□ -0.43
CLSTN3-213ENST00000541953 DYNLT3P51808 116 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms