RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 GPX4P36969 197 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CEACAM3P40198 252 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 P2RY2P41231 377 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 HTR2BP41595 481 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CYB561P49447 251 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ARPP19P56211 112 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CLDN6P56747 220 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 RIPPLY3P57055 190 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ATP6V0D1P61421 351 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 SLAQ13239 276 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 UBE2SQ16763 222 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 RPEL1Q2QD12 228 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CCDC58Q4VC31 144 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 FRMPD2BQ6IN97 320 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 PRMT9Q6P2P2 845 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 IDO2Q6ZQW0 420 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 Q6ZS52 159 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 TGIF2LYQ8IUE0 185 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ZBTB8OSQ8IWT0 167 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 FAM71AQ8IYT1 594 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 LRRC34Q8IZ02 419 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CCNYL1Q8N7R7 359 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 GATSQ8NAP1 163 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CHST4Q8NCG5 386 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 DUSP18Q8NEJ0 188 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 OR6K6Q8NGW6 343 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 OR51F2Q8NH61 342 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ZFP90Q8TF47 636 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 C2orf15Q8WU43 125 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 RCN3Q96D15 328 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 TCEAL4Q96EI5 215 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 CHMP6Q96FZ7 201 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 DUS3LQ96G46 650 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 AURKBQ96GD4 344 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 SMIM10Q96HG1 83 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 OLFM3Q96PB7 478 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 NAA50Q9GZZ1 169 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 NEUROG2Q9H2A3 272 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 NXF3Q9H4D5 531 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 NANOGQ9H9S0 305 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 UGT1A7Q9HAW7 530 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 UGT1A8Q9HAW9 530 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 PATZ1Q9HBE1 687 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 MRPL40Q9NQ50 206 aaKnown RBP3.03□□□□□ -1.92
SNHG1-217ENST00000541578 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 FAIMQ9NVQ4 179 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 GID8Q9NWU2 228 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ADAM22Q9P0K1 906 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 ST3GAL6Q9Y274 331 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 KCNE3Q9Y6H6 103 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 MYOFQ9NZM1 2061 aa3.03□□□□□ -1.92
SNHG1-217ENST00000541578 COL4A2P08572 1712 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 MYH11P35749 1972 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 DOPEY2Q9Y3R5 2298 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 PVALEFA0A1B0GWK0 134 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 A0A1W2PQ72 361 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 PSMB11A5LHX3 300 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 SLC22A20A6NK97 555 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 PDZK1P1A8MUH7 402 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF99A8MXY4 864 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 HACD1B0YJ81 288 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 EMC8O43402 210 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 PRB1P04280 392 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 APODP05090 189 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 EIF4EP06730 217 aaKnown RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 IGHV3-43DP0DP04 118 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RAB5AP20339 215 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 NUDT1P36639 197 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 CFHR2P36980 270 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 CEACAM6P40199 344 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 CSKP41240 450 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 FGF8P55075 233 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 AP1S2P56377 157 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 XIAPP98170 497 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 SEMG2Q02383 582 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 REG3AQ06141 175 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 XRCC4Q13426 336 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RCAN2Q14206 197 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 GPR176Q14439 515 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 GINS1Q14691 196 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 HERPUD1Q15011 391 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 VAMP3Q15836 100 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF726P1Q15940 193 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 TTLL9Q3SXZ7 439 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 METTL21CQ5VZV1 264 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 TEX43Q6ZNM6 134 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF493Q6ZR52 646 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RFLNAQ6ZTI6 216 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 STRADAQ7RTN6 431 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 OR2W3Q7Z3T1 314 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 ABHD12BQ7Z5M8 362 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RBM45Q8IUH3 476 aaKnown RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 KIF2BQ8N4N8 673 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 NATD1Q8N6N6 113 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 DCAF4L2Q8NA75 395 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 OR52E2Q8NGJ4 325 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 OR6X1Q8NH79 312 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 CLHC1Q8NHS4 586 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms