RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PAHP00439 452 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 CALCBP10092 127 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 EGR1P18146 543 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 BCL3P20749 454 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 MPZP25189 248 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 GATA4P43694 442 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 NPBWR2P48146 333 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 RORCP51449 518 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 PSMD7P51665 324 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 GMFBP60983 142 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 MZT1Q08AG7 82 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 TESK1Q15569 626 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 RAB11BQ15907 218 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 FAM201AQ5SY85 155 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 AWAT2Q6E213 333 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 OR10K2Q6IF99 312 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 METAP1DQ6UB28 335 aaPredicted RBP7.87□□□□□ -1.15
DDX55-208ENST00000541259 WDR82Q6UXN9 313 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 ASCL4Q6XD76 172 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 C19orf18Q8NEA5 215 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 OR6M1Q8NGM8 313 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 OR10K1Q8NGX5 313 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 YIPF5Q969M3 257 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 SEH1LQ96EE3 360 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 UQCC2Q9BRT2 126 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 PKIBQ9C010 78 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 EGLN1Q9GZT9 426 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 STEAP1Q9UHE8 339 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 PPP1R3CQ9UQK1 317 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 PLEKHA6Q9Y2H5 1048 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 BAHCC1Q9P281 2608 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 CSMD2Q7Z408 3487 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
DDX55-208ENST00000541259 UNC79Q9P2D8 2635 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 IGHV1-69-2A0A0G2JMI3 117 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 hCG_1807616A0A1W2PRN6 198 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 WNT9BO14905 357 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 AKR7A2O43488 359 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 ZNF205O95201 554 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 SFTPBP07988 381 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 PGA5P0DJD9 388 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 TNFRSF1AP19438 455 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 CFPP27918 469 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 QRFPP83859 136 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 IL24Q13007 206 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 RIN1Q13671 783 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 C2orf76Q3KRA6 126 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 MKXQ8IYA7 352 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 BOLLQ8N9W6 283 aaKnown RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 PNLDC1Q8NA58 520 aaKnown RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 OR51D1Q8NGF3 324 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 OR5H6Q8NGV6 325 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 Q8TCH9 128 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 LRRC29Q8WV35 223 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 NEU4Q8WWR8 484 aaPredicted RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 CCL17Q92583 94 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 SLIRPQ9GZT3 109 aaKnown RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 WDR13Q9H1Z4 485 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 FN3KRPQ9HA64 309 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 ELL3Q9HB65 397 aaPredicted RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 SMURF1Q9HCE7 757 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 CCDC59Q9P031 241 aaKnown RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 IL36RNQ9UBH0 155 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 OR5V1Q9UGF6 321 aa7.86□□□□□ -1.15
DDX55-208ENST00000541259 FBXO9Q9UK97 447 aaPredicted RBP7.86□□□□□ -1.15
DDX55-208ENST00000541259 TMEM272A0A1B0GTI8 110 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 TRAPPC2LH3BP13 241 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 LDLRAD4O15165 306 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 KDM4BO94953 1096 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 HTR3BO95264 441 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 LHBP01229 141 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 IGHV4-39P01824 125 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 TFF1P04155 84 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 DAOP14920 347 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 ARSBP15848 533 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 SERPINA2P20848 420 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 CD80P33681 288 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 EFNA4P52798 201 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 EFNB2P52799 333 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 SNU13P55769 128 aaKnown RBP7.85□□□□□ -1.15
DDX55-208ENST00000541259 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 UNC119Q13432 240 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 RSU1Q15404 277 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 SLC22A6Q4U2R8 563 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 BIVMQ86UB2 503 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 CROCCP3Q8IVE0 287 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 SAXO1Q8IYX7 474 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 GCSAMQ8N6F7 178 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 ZSCAN4Q8NAM6 433 aaPredicted RBP7.85□□□□□ -1.15
DDX55-208ENST00000541259 POC1AQ8NBT0 407 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 TMEM104Q8NE00 496 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 PXT1Q8NFP0 134 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 OR10Z1Q8NGY1 313 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 ZNF671Q8TAW3 534 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 TBC1D15Q8TC07 691 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 LGALS14Q8TCE9 139 aa7.85□□□□□ -1.15
DDX55-208ENST00000541259 FAM46BQ96A09 425 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms