RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MAS1P04201 325 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 RPS2P15880 293 aaKnown RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 SRMP19623 302 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 FSTP19883 344 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 FABP5Q01469 135 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 HSD17B12Q53GQ0 312 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 DDI2Q5TDH0 399 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 CLEC9AQ6UXN8 241 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 SAXO1Q8IYX7 474 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 OR8B3Q8NGG8 313 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 OR5D18Q8NGL1 313 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 MSI2Q96DH6 328 aaKnown RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 NEIL1Q96FI4 390 aaPredicted RBP12.95□□□□□ -0.34
DDB1-218ENST00000540784 OR8B2Q96RD0 313 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 SLITRK2Q9H156 845 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 NLKQ9UBE8 527 aa12.95□□□□□ -0.34
DDB1-218ENST00000540784 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 FAM157AC9JC47 383 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 ANGPTL7O43827 346 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 TGFAP01135 160 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 UCHL1P09936 223 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 GABRA2P47869 451 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 ERVK11-1P61568 191 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 SMIM21Q3B7S5 101 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 FAM27D1Q5T7N8 215 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 ATPAF1Q5TC12 328 aaPredicted RBP12.94□□□□□ -0.34
DDB1-218ENST00000540784 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 Q8IYB0 196 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 BATF2Q8N1L9 274 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 CCL13Q99616 98 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
DDB1-218ENST00000540784 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
DDB1-218ENST00000540784 HIVEP1P15822 2718 aa12.94□□□□□ -0.34
DDB1-218ENST00000540784 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 F5H0A9 414 aaPredicted RBP12.93□□□□□ -0.34
DDB1-218ENST00000540784 F8VVB4 439 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 F8VWA3 439 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 GABRPO00591 440 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 CD5LO43866 347 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 FOXH1O75593 365 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 PSG2P11465 335 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 BCL3P20749 454 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 PRDX2P32119 198 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 PTGFRP43088 359 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 NPBWR2P48146 333 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
DDB1-218ENST00000540784 ZP1P60852 638 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 ESCO2Q56NI9 601 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 STUMQ69YW2 141 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 CRIP3Q6Q6R5 217 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 SLC36A1Q7Z2H8 476 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 PNLDC1Q8NA58 520 aaKnown RBP12.93□□□□□ -0.34
DDB1-218ENST00000540784 ANGPTL6Q8NI99 470 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 MUL1Q969V5 352 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 MED30Q96HR3 178 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 S100A13Q99584 98 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 DNTTIP1Q9H147 329 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 ELL3Q9HB65 397 aaPredicted RBP12.93□□□□□ -0.34
DDB1-218ENST00000540784 LPAR2Q9HBW0 351 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 HES4Q9HCC6 221 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 SMURF1Q9HCE7 757 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 KAAG1Q9UBP8 84 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
DDB1-218ENST00000540784 FLNAP21333 2647 aaKnown RBP12.92□□□□□ -0.34
DDB1-218ENST00000540784 CELSR1Q9NYQ6 3014 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 IGKV1-12A0A0C4DH73 117 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 RFPL4AA6NLU0 287 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 RFPL4AL1F8VTS6 287 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 IGKV1D-12P01611 117 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 MSMBP08118 114 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 GALP22466 123 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 PITPNBP48739 271 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 GNB2P62879 340 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 LCN2P80188 198 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 CD200R1LQ6Q8B3 271 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 FIP1L1Q6UN15 594 aaKnown RBP12.92□□□□□ -0.34
DDB1-218ENST00000540784 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 FAM58AQ8N1B3 248 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 JAGN1Q8N5M9 183 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 PXT1Q8NFP0 134 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 EMG1Q92979 244 aaKnown RBP12.92□□□□□ -0.34
DDB1-218ENST00000540784 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
DDB1-218ENST00000540784 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
DDB1-218ENST00000540784 FAM192AQ9GZU8 254 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 RHOFQ9HBH0 211 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 CLN8Q9UBY8 286 aa12.92□□□□□ -0.34
DDB1-218ENST00000540784 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 MAGEA13PA6NCF6 341 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
DDB1-218ENST00000540784 TRIM64CA6NLI5 447 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms