RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SETD9Q8NE22 299 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 GNPDA2Q8TDQ7 276 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 ISOC1Q96CN7 298 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 OCSTAMPQ9BR26 566 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 ABHD6Q9BV23 337 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 OSBPL10Q9BXB5 764 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 OR51I2Q9H344 312 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 RGCCQ9H4X1 137 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 HEXA-AS1Q9H8Q6 139 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 SP140LQ9H930 580 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 CENPMQ9NSP4 180 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
YBX3-209ENST00000540747 LOC100130705A0A1B0GUX0 176 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ANXA2P2A6NMY6 339 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ZNF850A8MQ14 1090 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 C17orf98A8MV24 154 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 APOC1P02654 83 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ALPLP05186 524 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 GYPBP06028 91 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ANXA2P07355 339 aaKnown RBP5.87□□□□□ -1.47
YBX3-209ENST00000540747 CLUP10909 449 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 FAHP16930 419 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 DCKP27707 260 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 GNALP38405 381 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 SLC15A1P46059 708 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TMBIM6P55061 237 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 GABARAPL2P60520 117 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 ZNF273Q14593 569 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TAF13Q15543 124 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TMEM95Q3KNT9 176 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TMEM200BQ69YZ2 307 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 OR2T5Q6IEZ7 315 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 RASSF6Q6ZTQ3 369 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TIGD4Q8IY51 512 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 FAM185AQ8N0U4 392 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 CD177Q8N6Q3 437 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 OR2T29Q8NH02 315 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 OR4Q3Q8NH05 313 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 AQP3Q92482 292 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 B9D2Q9BPU9 175 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 OR10A2Q9H208 303 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 SCN3BQ9NY72 215 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 TPRKBQ9Y3C4 175 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 N6AMT1Q9Y5N5 214 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 LYSTQ99698 3801 aa5.87□□□□□ -1.47
YBX3-209ENST00000540747 A0A1B0GVG6 124 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 FAM90A22PA8MWA6 464 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 SLC16A6O15403 523 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 PFDN1O60925 122 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 IGLV3-1P01715 115 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 RBP4P02753 201 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 FABP3P05413 133 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 CCL3L1P16619 93 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 PRKACGP22612 351 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 GLRA1P23415 457 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 COX7A1P24310 79 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 RRM2P31350 389 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 IFNGR2P38484 337 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 RAB13P51153 203 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 BLVRAP53004 296 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 PSMA6P60900 246 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 RPL31P62899 125 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 BLCAPP62952 87 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 EIF2B1Q14232 305 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 ZNF626Q68DY1 528 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 ACP7Q6ZNF0 438 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 TMEM219Q86XT9 240 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 CALHM1Q8IU99 346 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 ZDHHC23Q8IYP9 409 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 FTMTQ8N4E7 242 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 POC1AQ8NBT0 407 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 TMEM185AQ8NFB2 350 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 OR11H6Q8NGC7 330 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 OR9Q2Q8NGE9 314 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 OR52L1Q8NGH7 329 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 FOXRED1Q96CU9 486 aaPredicted RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 RNF170Q96K19 258 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 MBOAT4Q96T53 435 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 NKX3-1Q99801 234 aaPredicted RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 APOL4Q9BPW4 351 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 DCUN1D5Q9BTE7 237 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 PRSS22Q9GZN4 317 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 CCDC90BQ9GZT6 254 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 RIBC2Q9H4K1 309 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 IL1RAPQ9NPH3 570 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 INPP5EQ9NRR6 644 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 TBC1D23Q9NUY8 699 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 DNAJC27Q9NZQ0 273 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 WARS2Q9UGM6 360 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 TBL2Q9Y4P3 447 aaKnown RBP5.86□□□□□ -1.47
YBX3-209ENST00000540747 HSPE1-MOB4S4R3N1 261 aa5.86□□□□□ -1.47
YBX3-209ENST00000540747 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 RFPL4AA6NLU0 287 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 PTGES3LE9PB15 166 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 RFPL4AL1F8VTS6 287 aa5.85□□□□□ -1.47
YBX3-209ENST00000540747 H3BMQ9 156 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms