RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 FAHD1Q6P587 224 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 ASRGL1Q7L266 308 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 BCDIN3DQ7Z5W3 292 aaKnown RBP11.45□□□□□ -0.58
SNHG1-213ENST00000540725 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 ELMOD2Q8IZ81 293 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 NRBF2Q96F24 287 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 PRRG3Q9BZD7 231 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 HES4Q9HCC6 221 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 R4GMQ9 66 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 V9GYS6 101 aa11.45□□□□□ -0.58
SNHG1-213ENST00000540725 A0A1B0GTI1 187 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 A6NIN4 97 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 M0R129 80 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 TK1P04183 234 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 VSIG10L2P0DP72 767 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 PIPP12273 146 aaPredicted RBP11.44□□□□□ -0.58
SNHG1-213ENST00000540725 DAPP51397 102 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 ACTR3P61158 418 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 PLEKHG7Q6ZR37 379 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 MEPCEQ7L2J0 689 aaKnown RBP11.44□□□□□ -0.58
SNHG1-213ENST00000540725 LHFPL4Q7Z7J7 247 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 DTX3Q8N9I9 347 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 OR14K1Q8NGZ2 314 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 MNTQ99583 582 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 NKX3-1Q99801 234 aaPredicted RBP11.44□□□□□ -0.58
SNHG1-213ENST00000540725 ADGRL4Q9HBW9 690 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 OR52A1Q9UKL2 312 aa11.44□□□□□ -0.58
SNHG1-213ENST00000540725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNHG1-213ENST00000540725 FAM90A8PA6NJQ4 464 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 DHRS7CA6NNS2 312 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 VGLL3A8MV65 326 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 ZNF670-ZNF695F2Z2N8 137 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 GYG2O15488 501 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 DLX6P56179 175 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 ERVK11-1P61568 191 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 DNAL1Q4LDG9 190 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 PLA1AQ53H76 456 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 Q6ZSR3 168 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 ANGPTL5Q86XS5 388 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 DYNAPQ8N1N2 210 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 TCEANCQ8N8B7 351 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 ASCC1Q8N9N2 400 aaKnown RBP11.43□□□□□ -0.58
SNHG1-213ENST00000540725 CLN6Q9NWW5 311 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 H2AFY2Q9P0M6 372 aaPredicted RBP11.43□□□□□ -0.58
SNHG1-213ENST00000540725 MRM2Q9UI43 246 aaKnown RBP11.43□□□□□ -0.58
SNHG1-213ENST00000540725 SNX5Q9Y5X3 404 aa11.43□□□□□ -0.58
SNHG1-213ENST00000540725 C17orf98A8MV24 154 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 K7N7A8 449 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 COL10A1Q03692 680 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 IL24Q13007 206 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 SAMD5Q5TGI4 173 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 AADACL4Q5VUY2 407 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 NXNL2Q5VZ03 156 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 TRMT10AQ8TBZ6 339 aaKnown RBP11.42□□□□□ -0.58
SNHG1-213ENST00000540725 TMEM163Q8TC26 289 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 FOXRED1Q96CU9 486 aaPredicted RBP11.42□□□□□ -0.58
SNHG1-213ENST00000540725 PKIBQ9C010 78 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 ZNF702PQ9H963 129 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 SLC22A13Q9Y226 551 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 TCF19Q9Y242 345 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 POMPQ9Y244 141 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 TBL2Q9Y4P3 447 aaKnown RBP11.42□□□□□ -0.58
SNHG1-213ENST00000540725 DNAH3Q8TD57 4116 aa11.42□□□□□ -0.58
SNHG1-213ENST00000540725 FAM230AA0A1W2PPH8 454 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 MEX3AA1L020 520 aaKnown RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ODF3BA8MYP8 253 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 MITFO75030 526 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ARG1P05089 322 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ZNF728P0DKX0 622 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CCL1P22362 96 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 EPHA2P29317 976 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 RAB13P51153 203 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 EDDM3BP56851 147 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 EFNB1P98172 346 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 HABP2Q14520 560 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 KPRPQ5T749 579 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 SLX4IPQ5VYV7 408 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 OR13D1Q8NGV5 346 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 RPS4Y2Q8TD47 263 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 UTP4Q969X6 686 aaKnown RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CDCA4Q9BXL8 241 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 PLEKHA1Q9HB21 404 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 KRT84Q9NSB2 600 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 SERTAD4Q9NUC0 356 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 A6NDX4 124 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ZAR1LA6NP61 321 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ZNF737O75373 536 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 FBXO24O75426 580 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 RPP14O95059 124 aaKnown RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 RBP4P02753 201 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CHRM2P08172 466 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ODF4Q2M2E3 257 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 LDLRAD2Q5SZI1 272 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms