RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 RABL2AQ9UBK7 228 aaPredicted RBP1.17□□□□□ -2.22
MDM2-227ENST00000540709 TAC3Q9UHF0 121 aa1.17□□□□□ -2.22
MDM2-227ENST00000540709 VAX2Q9UIW0 290 aa1.17□□□□□ -2.22
MDM2-227ENST00000540709 SVILO95425 2214 aa1.17□□□□□ -2.22
MDM2-227ENST00000540709 OR2A4O95047 310 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 GNRHRP30968 328 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 SLC18A1P54219 525 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 RPL10AP62906 217 aaKnown RBP1.16□□□□□ -2.22
MDM2-227ENST00000540709 ZNF181Q2M3W8 571 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 ZCCHC24Q8N2G6 241 aaKnown RBP1.16□□□□□ -2.22
MDM2-227ENST00000540709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.16□□□□□ -2.22
MDM2-227ENST00000540709 C20orf166-AS1Q96NR2 134 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 OR2A7Q96R45 310 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 TRIB3Q96RU7 358 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 PRO0628Q9UI54 55 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 NAGKQ9UJ70 344 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 TBC1D24Q9ULP9 559 aa1.16□□□□□ -2.22
MDM2-227ENST00000540709 BRCA1P38398 1863 aaKnown RBP1.16□□□□□ -2.22
MDM2-227ENST00000540709 VWA8A3KMH1 1905 aa1.15□□□□□ -2.22
MDM2-227ENST00000540709 IGHV2OR16-5A0A0B4J2B6 119 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 A0A1W2PNM2 257 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 SLC22A20A6NK97 555 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 J3QT63 122 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ZNF701M0R085 212 aaPredicted RBP1.15□□□□□ -2.23
MDM2-227ENST00000540709 DFFAO00273 331 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 PSIP1O75475 530 aaKnown RBP1.15□□□□□ -2.23
MDM2-227ENST00000540709 CD82P27701 267 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 CFHR2P36980 270 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ST3GAL4Q11206 333 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 WDR43Q15061 677 aaKnown RBP eCLIP1.15□□□□□ -2.23
MDM2-227ENST00000540709 PMVKQ15126 192 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ATP6AP1LQ52LC2 224 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ZNF322Q6U7Q0 402 aaPredicted RBP1.15□□□□□ -2.23
MDM2-227ENST00000540709 FAM122BQ7Z309 247 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 LYZL2Q7Z4W2 148 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 COMMD1Q8N668 190 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ZNF738Q8NE65 137 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 OR8K1Q8NGG5 319 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 OR4K13Q8NH42 304 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ZFAND1Q8TCF1 268 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 TMEM234Q8WY98 164 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 ISOC2Q96AB3 205 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 MTG1Q9BT17 334 aaPredicted RBP1.15□□□□□ -2.23
MDM2-227ENST00000540709 SRRQ9GZT4 340 aa1.15□□□□□ -2.23
MDM2-227ENST00000540709 IQCGQ9H095 443 aaKnown RBP1.15□□□□□ -2.23
MDM2-227ENST00000540709 IGHV3-21A0A0B4J1V1 117 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 A0A0B4J2C4 111 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 ZNF729A6NN14 1252 aaPredicted RBP1.14□□□□□ -2.23
MDM2-227ENST00000540709 G3V3Q6 166 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 TRDMT1O14717 391 aaKnown RBP1.14□□□□□ -2.23
MDM2-227ENST00000540709 SLC37A4O43826 429 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 DNAJB6O75190 326 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CTAG2O75638 210 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 PTTG1O95997 202 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 GCGP01275 180 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CRABP2P29373 138 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 PAFAH1B2P68402 229 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 BEX3Q00994 111 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 LINC00303Q3SY05 128 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CDNFQ49AH0 187 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 TTC32Q5I0X7 151 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 MLIPQ5VWP3 458 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CLEC18BQ6UXF7 455 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CYP4Z2PQ8N1L4 340 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 BBOF1Q8ND07 529 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 ZNF555Q8NEP9 628 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 OR6K6Q8NGW6 343 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 OR8S1Q8NH09 359 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 APOBEC3DQ96AK3 386 aaPredicted RBP1.14□□□□□ -2.23
MDM2-227ENST00000540709 SMIM8Q96KF7 97 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 OR2M4Q96R27 311 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 NAA50Q9GZZ1 169 aaKnown RBP1.14□□□□□ -2.23
MDM2-227ENST00000540709 TXNIPQ9H3M7 391 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 ARMC7Q9H6L4 198 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 CFL2Q9Y281 166 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 ORC6Q9Y5N6 252 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 INSIG2Q9Y5U4 225 aa1.14□□□□□ -2.23
MDM2-227ENST00000540709 COL11A1P12107 1806 aaPredicted RBP1.14□□□□□ -2.23
MDM2-227ENST00000540709 SBNO1A3KN83 1393 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 TRAV25A0A0B4J276 109 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 GOLGA8TH3BQL2 631 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 K7EPK0 472 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 TCAPO15273 167 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 OR8G3PP0DMU2 310 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 HOXB8P17481 243 aaPredicted RBP1.13□□□□□ -2.23
MDM2-227ENST00000540709 GZMHP20718 246 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 MSR1P21757 451 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 CCL23P55773 120 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 CLEC19AQ6UXS0 136 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 KATNAL2Q8IYT4 538 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 OFCC1Q8IZS5 231 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 CMTM8Q8IZV2 173 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 TRAM1L1Q8N609 369 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 OR52K2Q8NGK3 314 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 NAT6Q93015 286 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 TMED9Q9BVK6 235 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 TUBA4BQ9H853 241 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 MRPL16Q9NX20 251 aaKnown RBP1.13□□□□□ -2.23
MDM2-227ENST00000540709 SLC7A11Q9UPY5 501 aa1.13□□□□□ -2.23
MDM2-227ENST00000540709 ZNF443Q9Y2A4 671 aaPredicted RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms