RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 MORN3Q6PF18 240 aaPredicted RBP3.41□□□□□ -1.86
TRAV11-201ENST00000539512 NDNFQ8TB73 568 aa3.41□□□□□ -1.86
TRAV11-201ENST00000539512 LHX5Q9H2C1 402 aa3.41□□□□□ -1.86
TRAV11-201ENST00000539512 TRAPPC8Q9Y2L5 1435 aa3.41□□□□□ -1.86
TRAV11-201ENST00000539512 FRMPD1Q5SYB0 1578 aa3.41□□□□□ -1.86
TRAV11-201ENST00000539512 PRDM2Q13029 1718 aa3.41□□□□□ -1.86
TRAV11-201ENST00000539512 ZCCHC11Q5TAX3 1644 aaKnown RBP3.41□□□□□ -1.86
TRAV11-201ENST00000539512 TCAPO15273 167 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 SNRPAP09012 282 aaKnown RBP3.4□□□□□ -1.87
TRAV11-201ENST00000539512 OR5AL1P0C617 328 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 OR4Q2P0C623 313 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 RPL10AP62906 217 aaKnown RBP3.4□□□□□ -1.87
TRAV11-201ENST00000539512 TTC32Q5I0X7 151 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 FAM131AQ6UXB0 335 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 TMEM136Q6ZRR5 245 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 ITPRIPQ8IWB1 547 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 OR51A7Q8NH64 312 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 CENPNQ96H22 339 aaPredicted RBP3.4□□□□□ -1.87
TRAV11-201ENST00000539512 OR2M4Q96R27 311 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 SIGLEC1Q9BZZ2 1709 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 FBXO44Q9H4M3 255 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 TDRD3Q9H7E2 651 aaKnown RBP3.4□□□□□ -1.87
TRAV11-201ENST00000539512 OR2S2Q9NQN1 319 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 SLC7A11Q9UPY5 501 aa3.4□□□□□ -1.87
TRAV11-201ENST00000539512 DENND4BO75064 1496 aaPredicted RBP3.4□□□□□ -1.87
TRAV11-201ENST00000539512 CPS1P31327 1500 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 ARHGEF12Q9NZN5 1544 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 FAM240AA0A1B0GVK7 77 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 C9JQL5 133 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 RPL31P62899 125 aaKnown RBP3.39□□□□□ -1.87
TRAV11-201ENST00000539512 ZNF678Q5SXM1 525 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 ZCCHC24Q8N2G6 241 aaKnown RBP3.39□□□□□ -1.87
TRAV11-201ENST00000539512 OR2M7Q8NG81 312 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 NT5CQ8TCD5 201 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 YIPF5Q969M3 257 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 BCL7BQ9BQE9 202 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 TMED9Q9BVK6 235 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 COA1Q9GZY4 146 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 GAL3ST2Q9H3Q3 398 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 WDR55Q9H6Y2 383 aaPredicted RBP3.39□□□□□ -1.87
TRAV11-201ENST00000539512 LRP6O75581 1613 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 ZFYVE16Q7Z3T8 1539 aa3.39□□□□□ -1.87
TRAV11-201ENST00000539512 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 IGKV1-6A0A0C4DH72 117 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 RGS5O15539 181 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 GATCO43716 136 aaKnown RBP3.38□□□□□ -1.87
TRAV11-201ENST00000539512 SNAI1O95863 264 aaPredicted RBP3.38□□□□□ -1.87
TRAV11-201ENST00000539512 CXorf1O96002 111 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 IGKV1-39P01597 117 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 IGKV1D-39P04432 117 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 GNRHRP30968 328 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 MLF1P58340 268 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 IDNKQ5T6J7 187 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 FAM27D1Q5T7N8 215 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 FAM104BQ5XKR9 115 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 APOBEC3HQ6NTF7 200 aaKnown RBP3.38□□□□□ -1.87
TRAV11-201ENST00000539512 DERL3Q96Q80 235 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 MS4A8Q9BY19 250 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 VCX3AQ9NNX9 186 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 CA10Q9NS85 328 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
TRAV11-201ENST00000539512 DOCK8Q8NF50 2099 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 WRNQ14191 1432 aaPredicted RBP eCLIP3.37□□□□□ -1.87
TRAV11-201ENST00000539512 RNF113AO15541 343 aaKnown RBP3.37□□□□□ -1.87
TRAV11-201ENST00000539512 PAX6P26367 422 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 IFFO1Q0D2I5 559 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 FAM53BQ14153 422 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 FBXL19-AS1Q494R0 122 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 CLEC19AQ6UXS0 136 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 OR4A15Q8NGL6 344 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 ABCB9Q9NP78 766 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 RBM22Q9NW64 420 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRAV11-201ENST00000539512 TAS2R1Q9NYW7 299 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 V9GYY9 64 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 RAPGEF6Q8TEU7 1601 aa3.37□□□□□ -1.87
TRAV11-201ENST00000539512 TCOF1Q13428 1488 aaKnown RBP3.36□□□□□ -1.87
TRAV11-201ENST00000539512 NEO1Q92859 1461 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 RAPGEF2Q9Y4G8 1499 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 A0A0J9YYE9 177 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 ALOX12BO75342 701 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 OR2A4O95047 310 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 OTCP00480 354 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 TRBC1P01850 177 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 HTR2BP41595 481 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 TUFMP49411 452 aaKnown RBP3.36□□□□□ -1.87
TRAV11-201ENST00000539512 OR12D2P58182 307 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 KRTAP10-1P60331 282 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 IL5RAQ01344 420 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 TMEM69Q5SWH9 247 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 UGT2A3Q6UWM9 527 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 FAM231DQ6ZW35 169 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 ZDHHC22Q8N966 263 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 OR5H2Q8NGV7 314 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 RBPMSQ93062 196 aaKnown RBP3.36□□□□□ -1.87
TRAV11-201ENST00000539512 SMIM8Q96KF7 97 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 OR2A7Q96R45 310 aa3.36□□□□□ -1.87
TRAV11-201ENST00000539512 TM6SF2Q9BZW4 377 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms