RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 C2orf50Q96LR7 162 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 GNRHR2Q96P88 292 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 FBLN5Q9UBX5 448 aa10.99□□□□□ -0.65
SFSWAP-208ENST00000539506 F5H5K5 113 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 H7C1Q1 480 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 HIST1H1DP16402 221 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CLDN17P56750 224 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CYCSP99999 105 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 NHLH2Q02577 135 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 HLA-BQ31612 363 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 PHLDA2Q53GA4 152 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 BTNL8Q6UX41 500 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 DMBX1Q8NFW5 382 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ASB13Q8WXK3 278 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF385AQ96PM9 386 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 UMAD1C9J7I0 102 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 STMND1H3BQB6 276 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 UMODP07911 640 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 TSPAN7P41732 249 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 SLC6A9P48067 706 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 NDUFA6P56556 154 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 H3F3AP84243 136 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 TLE1Q04724 770 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF565Q8N9K5 539 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 SUMF1Q8NBK3 374 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 SHDQ96IW2 340 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 UCN2Q96RP3 112 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF2Q9BSG1 426 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 PRRC2CQ9Y520 2896 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ANGPTL7O43827 346 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CD5P06127 495 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CD63P08962 238 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 SPINK2P20155 84 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CCL1P22362 96 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 PPP1CCP36873 323 aaKnown RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CAMLGP49069 296 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 KCNMB1Q16558 191 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 GUK1Q16774 197 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 CHRFAM7AQ494W8 412 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 C17orf78Q8N4C9 275 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 POC1AQ8NBT0 407 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 OR14K1Q8NGZ2 314 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF837Q96EG3 531 aaPredicted RBP10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
SFSWAP-208ENST00000539506 DHRS7CA6NNS2 312 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 CCL3P10147 92 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 RBMXP38159 391 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 PLXDC2Q6UX71 529 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF283Q8N7M2 679 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 OR9K2Q8NGE7 335 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 NXT1Q9UKK6 140 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 OR5H15A6NDH6 313 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 CDRT15L2A8MXV6 281 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 RAB5AP20339 215 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 DVL1P1P54792 670 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF239Q16600 458 aaKnown RBP10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 LYSMD4Q5XG99 296 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 FAM180AQ6UWF9 173 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 TMEM182Q6ZP80 229 aaPredicted RBP10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 P4HA3Q7Z4N8 544 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 DTWD2Q8NBA8 298 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 PFDN5Q99471 154 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 DUSP23Q9BVJ7 150 aa10.97□□□□□ -0.65
SFSWAP-208ENST00000539506 TRBV6-7A0A0A0MS04 114 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 SULT1A1P50225 295 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 CCL20P78556 96 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 NAAAQ02083 359 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 ENDOGQ14249 297 aaKnown RBP10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 GGNBP1Q5YKI7 109 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 LRRC18Q8N456 261 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 FAM213BQ8TBF2 198 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 AQP10Q96PS8 301 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 MOB1AQ9H8S9 216 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 RAB18Q9NP72 206 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 ANAPC10Q9UM13 185 aa10.96□□□□□ -0.65
SFSWAP-208ENST00000539506 IGHV1-45A0A0A0MS14 117 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF726A6NNF4 738 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 ZIC3O60481 467 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 KLF7O75840 302 aaPredicted RBP10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 DBHP09172 617 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 CCL4P13236 92 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 FAHP16930 419 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 UBE2V2Q15819 145 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 ACTBL2Q562R1 376 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 LYZL2Q7Z4W2 148 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF561Q8N587 486 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 ARL6IP6Q8N6S5 226 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 NABP1Q96AH0 204 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 MCTS1Q9ULC4 181 aaKnown RBP10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.66
SFSWAP-208ENST00000539506 LOC102725191A0A1B0GVB3 256 aa10.95□□□□□ -0.66
SFSWAP-208ENST00000539506 FAM157AC9JC47 383 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms