RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 CNN3Q15417 329 aaKnown RBP13.08□□□□□ -0.32
RPAIN-206ENST00000539417 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
RPAIN-206ENST00000539417 DCAF12L2Q5VW00 463 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 OR5D18Q8NGL1 313 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 TMIGD2Q96BF3 282 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 PKIBQ9C010 78 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 CCDC90BQ9GZT6 254 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 HES4Q9HCC6 221 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 IL36RNQ9UBH0 155 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 A0A1W2PPK0 400 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 OR2AT4A6NND4 320 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 PIN1P1O15428 100 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-206ENST00000539417 OCM2P0CE71 109 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 ADRA2CP18825 462 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 POU3F4P49335 361 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 IKZF1Q13422 519 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 SPHARQ15513 63 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 MED22Q15528 200 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 DGUOKQ16854 277 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 NLRC3Q7RTR2 1065 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 SERPINA12Q8IW75 414 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 CD177Q8N6Q3 437 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 TMEM106AQ96A25 262 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
RPAIN-206ENST00000539417 OR14A2Q96R54 314 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 SHARPINQ9H0F6 387 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 MAB21L2Q9Y586 359 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
RPAIN-206ENST00000539417 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 RFPL4AA6NLU0 287 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 RFPL4AL1F8VTS6 287 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 SULT1B1O43704 296 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 BCL3P20749 454 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 PRKACBP22694 351 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 GABRA2P47869 451 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 ATP1B3P54709 279 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 ACSM1Q08AH1 577 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 KCNJ8Q15842 424 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 CHRFAM7AQ494W8 412 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 ATPAF1Q5TC12 328 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-206ENST00000539417 PRSS48Q7RTY5 328 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 ELL3Q9HB65 397 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-206ENST00000539417 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
RPAIN-206ENST00000539417 POLDIP2Q9Y2S7 368 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 DOCK11Q5JSL3 2073 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 WNK2Q9Y3S1 2297 aa13.06□□□□□ -0.32
RPAIN-206ENST00000539417 TRAV8-7A0A075B6U6 113 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 TRBV5-7A0A0A0MS05 114 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 IGHV2-70DA0A0C4DH43 119 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 A0A0G2JMP0 313 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 A0A0X1KG70 313 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 NDUFA2O43678 99 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 NXPH2O95156 264 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 IGFBP3P17936 291 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-206ENST00000539417 TAS2R43P59537 309 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 ZP1P60852 638 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 PDZK1IP1Q13113 114 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 YIF1BQ5BJH7 314 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 LHFPL2Q6ZUX7 228 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 C1QL2Q7Z5L3 287 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 ZNRF1Q8ND25 227 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 OR4M2Q8NGB6 313 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 OR52N4Q8NGI2 321 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 OR5D14Q8NGL3 314 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 OR5V1Q9UGF6 321 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
RPAIN-206ENST00000539417 PPIAL4CA0A0B4J2A2 164 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 ALX3O95076 343 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 HCKP08631 526 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 ACAA1P09110 424 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-206ENST00000539417 EEF1B2P24534 225 aaKnown RBP13.04□□□□□ -0.32
RPAIN-206ENST00000539417 GP2P55259 537 aaKnown RBP13.04□□□□□ -0.32
RPAIN-206ENST00000539417 BDH1Q02338 343 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 KISS1Q15726 138 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 Q499Y3 187 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 FAM27D1Q5T7N8 215 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 RAB40AQ8WXH6 277 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
RPAIN-206ENST00000539417 RASL12Q9NYN1 266 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 GABRPO00591 440 aa13.04□□□□□ -0.32
RPAIN-206ENST00000539417 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms