RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ZNF747Q9BV97 191 aa9.5□□□□□ -0.89
RTN3-209ENST00000538995 INPP5EQ9NRR6 644 aa9.5□□□□□ -0.89
RTN3-209ENST00000538995 A0A0U1RQK1 487 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 A0A1B0GUS0 222 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 A0A1W2PPH5 198 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 A6NIN4 97 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 FADS2O95864 444 aaKnown RBP9.49□□□□□ -0.89
RTN3-209ENST00000538995 TFF1P04155 84 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
RTN3-209ENST00000538995 HTR1AP08908 422 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 FBP1P09467 338 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 DBTP11182 482 aaKnown RBP9.49□□□□□ -0.89
RTN3-209ENST00000538995 EEF1B2P24534 225 aaKnown RBP9.49□□□□□ -0.89
RTN3-209ENST00000538995 PRDX2P32119 198 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 CAPZA1P52907 286 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 OR12D2P58182 307 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 RAB40BQ12829 278 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 MRPL28Q13084 256 aaKnown RBP9.49□□□□□ -0.89
RTN3-209ENST00000538995 GALEQ14376 348 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 ZSCAN26Q16670 478 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 CALHM1Q8IU99 346 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 Q8IYB0 196 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 SYS1Q8N2H4 156 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 CD177Q8N6Q3 437 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 OR5D13Q8NGL4 314 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 HAVCR2Q8TDQ0 301 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 TNFRSF14Q92956 283 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 BORCS8Q96FH0 119 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 ZNF488Q96MN9 340 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 SLC29A1Q99808 456 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 FAM234AQ9H0X4 552 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 SIRT7Q9NRC8 400 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 MMP24Q9Y5R2 645 aa9.49□□□□□ -0.89
RTN3-209ENST00000538995 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 LOC100130705A0A1B0GUX0 176 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 FAM230AA0A1W2PPH8 454 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 RNASEK-C17orf49H0YIS7 233 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 IGHA1P01876 353 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 PRKACBP22694 351 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 UBE2E1P51965 193 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 NANOS3P60323 173 aaKnown RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 RPL31P62899 125 aaKnown RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 ACSM1Q08AH1 577 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 ANGPTL5Q86XS5 388 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 TRMT10AQ8TBZ6 339 aaKnown RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 DYRK2Q92630 601 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 STMN2Q93045 179 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 PELI1Q96FA3 418 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 C4orf36Q96KX1 117 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 CEP19Q96LK0 163 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 CHIAQ9BZP6 476 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 DPAGT1Q9H3H5 408 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 SEBOXQ9HB31 216 aaPredicted RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 ELL3Q9HB65 397 aaPredicted RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 C8orf4Q9NR00 106 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 MRPS18AQ9NVS2 196 aaKnown RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 FAM118AQ9NWS6 357 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 FRRS1LQ9P0K9 344 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 HHLA2Q9UM44 414 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 FAM96BQ9Y3D0 163 aa9.48□□□□□ -0.89
RTN3-209ENST00000538995 RPL36Q9Y3U8 105 aaKnown RBP9.48□□□□□ -0.89
RTN3-209ENST00000538995 IGKV1-27A0A075B6S5 117 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 hCG_1809904A0A1W2PP81 198 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 A0A1W2PPE2 198 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 A0A1W2PR64 198 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 A0A1W2PRV1 198 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 OR4C45A6NMZ5 311 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 H3BSH0 61 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 NPFFO15130 113 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 NDUFA7O95182 113 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 MT-ND2P03891 347 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 TK1P04183 234 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 CRYBA1P05813 215 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 ZNF20P17024 532 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 IER3P46695 156 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 RBP2P50120 134 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 ATP1B3P54709 279 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 ALKBH1Q13686 389 aaKnown RBP9.47□□□□□ -0.89
RTN3-209ENST00000538995 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 FIP1L1Q6UN15 594 aaKnown RBP9.47□□□□□ -0.89
RTN3-209ENST00000538995 LHFPL2Q6ZUX7 228 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 PDZD9Q8IXQ8 264 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 RDH10Q8IZV5 341 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 FAM185AQ8N0U4 392 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 OR4F5Q8NH21 305 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 ADAT3Q96EY9 351 aaPredicted RBP9.47□□□□□ -0.89
RTN3-209ENST00000538995 ALG8Q9BVK2 526 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 JAM3Q9BX67 310 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 NEK6Q9HC98 313 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 SMPD3Q9NY59 655 aaPredicted RBP9.47□□□□□ -0.89
RTN3-209ENST00000538995 MTCH1Q9NZJ7 389 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 ZNRD1Q9P1U0 126 aa9.47□□□□□ -0.89
RTN3-209ENST00000538995 SF3B6Q9Y3B4 125 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms