RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NRBF2Q96F24 287 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 APOL4Q9BPW4 351 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 PRRG3Q9BZD7 231 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 NPFFR1Q9GZQ6 430 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 ADGRL4Q9HBW9 690 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 OR52A1Q9UKL2 312 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 R4GMQ9 66 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 TET2Q6N021 2002 aaPredicted RBP10.14□□□□□ -0.79
VAMP1-206ENST00000538970 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 A0A1W2PR64 198 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 FAM90A8PA6NJQ4 464 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 DHRS7CA6NNS2 312 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 C17orf98A8MV24 154 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 VGLL3A8MV65 326 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 G3V4G9 280 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 OPN1MWP04001 364 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 OPN1MW2P0DN77 364 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 OPN1MW3P0DN78 364 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 DAPP51397 102 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 DLX6P56179 175 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 ERVK11-1P61568 191 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 ESRRGP62508 458 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 BEAN1Q3B7T3 259 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 DNAL1Q4LDG9 190 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 KPRPQ5T749 579 aaPredicted RBP10.13□□□□□ -0.79
VAMP1-206ENST00000538970 AADACL4Q5VUY2 407 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 NXNL2Q5VZ03 156 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 MEPCEQ7L2J0 689 aaKnown RBP10.13□□□□□ -0.79
VAMP1-206ENST00000538970 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 CALHM1Q8IU99 346 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 MNTQ99583 582 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 PKIBQ9C010 78 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 OR14J1Q9UGF5 321 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 MRM2Q9UI43 246 aaKnown RBP10.13□□□□□ -0.79
VAMP1-206ENST00000538970 POMPQ9Y244 141 aa10.13□□□□□ -0.79
VAMP1-206ENST00000538970 A6NIN4 97 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 ODF3BA8MYP8 253 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF670-ZNF695F2Z2N8 137 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 GYG2O15488 501 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 PIPP12273 146 aaPredicted RBP10.12□□□□□ -0.79
VAMP1-206ENST00000538970 CCL1P22362 96 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 LGALS4P56470 323 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 ACTR3P61158 418 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 EFNB1P98172 346 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 IL24Q13007 206 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 SAMD5Q5TGI4 173 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 SLX4IPQ5VYV7 408 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 TCEANCQ8N8B7 351 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 TMEM163Q8TC26 289 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 UTP4Q969X6 686 aaKnown RBP10.12□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.12□□□□□ -0.79
VAMP1-206ENST00000538970 SLC22A13Q9Y226 551 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 TCF19Q9Y242 345 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 SNX5Q9Y5X3 404 aa10.12□□□□□ -0.79
VAMP1-206ENST00000538970 ZAR1LA6NP61 321 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 K7N7A8 449 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 MITFO75030 526 aaPredicted RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF737O75373 536 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 RBP4P02753 201 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 VSIG10L2P0DP72 767 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 EPHA2P29317 976 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 COL10A1Q03692 680 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 PLA1AQ53H76 456 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF626Q68DY1 528 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 C12orf73Q69YU5 71 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 CCBE1Q6UXH8 406 aaPredicted RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 ANGPTL5Q86XS5 388 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 Q8N2B8 174 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 DTX3Q8N9I9 347 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 ASCC1Q8N9N2 400 aaKnown RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 FOXRED1Q96CU9 486 aaPredicted RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 SLC7A6OSQ96CW6 309 aaPredicted RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 NKX3-1Q99801 234 aaPredicted RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 KRT84Q9NSB2 600 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
VAMP1-206ENST00000538970 TBL2Q9Y4P3 447 aaKnown RBP10.11□□□□□ -0.79
VAMP1-206ENST00000538970 FAM230AA0A1W2PPH8 454 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 MEX3AA1L020 520 aaKnown RBP10.1□□□□□ -0.79
VAMP1-206ENST00000538970 F8VVB4 439 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 F8VWA3 439 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 ARG1P05089 322 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 KRT8P05787 483 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 RAB13P51153 203 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 HABP2Q14520 560 aaPredicted RBP10.1□□□□□ -0.79
VAMP1-206ENST00000538970 LDLRAD2Q5SZI1 272 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 TCF23Q7RTU1 214 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 GID4Q8IVV7 300 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 OR13D1Q8NGV5 346 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 CEP19Q96LK0 163 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 CDCA4Q9BXL8 241 aa10.1□□□□□ -0.79
VAMP1-206ENST00000538970 CADM1Q9BY67 442 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms