RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 CD37P11049 281 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 BMP4P12644 408 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 ELK1P19419 428 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 TALDO1P37837 337 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 EFNB2P52799 333 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 ART1P52961 327 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 UNC119Q13432 240 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 LSAMPQ13449 338 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 SPRNQ5BIV9 151 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 CNIH2Q6PI25 160 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 ZNF826PQ6ZT77 177 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 OR2W3Q7Z3T1 314 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 MOGAT3Q86VF5 341 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
CD4-208ENST00000538827 ZSCAN4Q8NAM6 433 aaPredicted RBP11.98□□□□□ -0.49
CD4-208ENST00000538827 PXT1Q8NFP0 134 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 AQP3Q92482 292 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 PHF21AQ96BD5 680 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 DIRAS2Q96HU8 199 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
CD4-208ENST00000538827 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 VRK1Q99986 396 aaPredicted RBP11.98□□□□□ -0.49
CD4-208ENST00000538827 ATG5Q9H1Y0 275 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 CBLN4Q9NTU7 201 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 DECR2Q9NUI1 292 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 GHRLQ9UBU3 117 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 TMEM14DPA8MWL7 114 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 CDC14BO60729 498 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 RHBDL1O75783 438 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 APOA1P02647 267 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 MGMTP16455 207 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 TNFSF8P32971 234 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 CCL8P80075 99 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 IL24Q13007 206 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 MPPED2Q15777 294 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 MST1LQ2TV78 715 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 LRRC28Q86X40 367 aaPredicted RBP11.97□□□□□ -0.49
CD4-208ENST00000538827 IZUMO1Q8IYV9 350 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 SAXO1Q8IYX7 474 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 CMTM4Q8IZR5 234 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 BOLLQ8N9W6 283 aaKnown RBP11.97□□□□□ -0.49
CD4-208ENST00000538827 TMEM104Q8NE00 496 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 KCNG3Q8TAE7 436 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 EMG1Q92979 244 aaKnown RBP11.97□□□□□ -0.49
CD4-208ENST00000538827 WDFY2Q96P53 400 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 SELENOIQ9C0D9 397 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 EGLN1Q9GZT9 426 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 CLEC4MQ9H2X3 399 aaPredicted RBP11.97□□□□□ -0.49
CD4-208ENST00000538827 FN3KRPQ9HA64 309 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 SAP30LQ9HAJ7 183 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 RBFOX1Q9NWB1 397 aaKnown RBP11.97□□□□□ -0.49
CD4-208ENST00000538827 RAB22AQ9UL26 194 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 TANC2Q9HCD6 1990 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 ABCA4P78363 2273 aa11.97□□□□□ -0.49
CD4-208ENST00000538827 ARFGEF3Q5TH69 2177 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 C3orf80F5H4A9 247 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 LDLRAD4O15165 306 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 SOD3P08294 240 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 PRKACAP17612 351 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 RAB6AP20340 208 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 MPZP25189 248 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 NPBWR2P48146 333 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 TLE4Q04727 773 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 IL18Q14116 193 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 GPR176Q14439 515 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 SPANXN2Q5MJ10 180 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 METAP1DQ6UB28 335 aaPredicted RBP11.96□□□□□ -0.49
CD4-208ENST00000538827 FAM131AQ6UXB0 335 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 OR51T1Q8NGJ9 327 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 LRRC29Q8WV35 223 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 S100ZQ8WXG8 99 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 URM1Q9BTM9 101 aaKnown RBP11.96□□□□□ -0.49
CD4-208ENST00000538827 CACNG6Q9BXT2 260 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 PCDHB16Q9NRJ7 776 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 TREM2Q9NZC2 230 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 IL36GQ9NZH8 169 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 IL19Q9UHD0 177 aa11.96□□□□□ -0.49
CD4-208ENST00000538827 AKR7A2O43488 359 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 ZNF780AO75290 641 aaPredicted RBP11.95□□□□□ -0.5
CD4-208ENST00000538827 CTAG2O75638 210 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 NXPH2O95156 264 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 SFTPBP07988 381 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 CD55P08174 381 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 ADH4P08319 380 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 GTF2F2P13984 249 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 GABRR1P24046 479 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 SSTR2P30874 369 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 PPOXP50336 477 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 QRFPP83859 136 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 PCGF3Q3KNV8 242 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 PIGYQ3MUY2 71 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 FAM209AQ5JX71 171 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 TMEM69Q5SWH9 247 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 C11orf71Q6IPW1 123 aa11.95□□□□□ -0.5
CD4-208ENST00000538827 WDR82Q6UXN9 313 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms