RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SOX7Q9BT81 388 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF385DQ9H6B1 395 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 TMEM38BQ9NVV0 291 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 COA4Q9NYJ1 87 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF835Q9Y2P0 537 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 A0A1W2PR77 199 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 HAND1O96004 215 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 BGLAPP02818 100 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 DCTDP32321 178 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 PNLIPRP3Q17RR3 467 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 HIST2H3PS2Q5TEC6 136 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 INO80CQ6PI98 192 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 DBX2Q6ZNG2 339 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ADAMTS17Q8TE56 1095 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 AKR1E2Q96JD6 320 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 CCL19Q99731 98 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 KCNK15Q9H427 330 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 PRSS50Q9UI38 385 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 PILRAQ9UKJ1 303 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SERPINE3A8MV23 424 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 PNPP00491 289 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ARG1P05089 322 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 GPR6P46095 362 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 TNXAQ16473 311 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 WDR31Q8NA23 367 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 FDCSPQ8NFU4 85 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 RAB33BQ9H082 229 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 CLEC5AQ9NY25 188 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF705FA8MVS1 300 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 GYPAP02724 150 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF705DP0CH99 300 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF705BP0CI00 300 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 RASL11BQ9BPW5 248 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 MS4A5Q9H3V2 200 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 HS3ST3B1Q9Y662 390 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 A0A0J9YW62 118 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 SLC17A2O00624 439 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 NME2P1O60361 137 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 OR4A8P0C604 315 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 BMI1P35226 326 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 RAB7AP51149 207 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 COL19A1Q14993 1142 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ADIRFQ15847 76 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 FAM181AQ8N9Y4 354 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
LRP6-203ENST00000538239 NDFIP1Q9BT67 221 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 LRFN3Q9BTN0 628 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 ZNF665Q9H7R5 613 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 CNTD2Q9H8S5 307 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 AK3Q9UIJ7 227 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 MPC1Q9Y5U8 109 aa4.73□□□□□ -1.65
LRP6-203ENST00000538239 OTOFQ9HC10 1997 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TRAV1-2A0A0B4J238 106 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CENPVL1A0A0U1RR11 272 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CLEC18AA5D8T8 446 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 GPR31O00270 319 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TAS2R45P59539 299 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CCL8P80075 99 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TMEM267Q0VDI3 215 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 TRAT1Q6PIZ9 186 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ASCL5Q7RTU5 278 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CLEC18CQ8NCF0 446 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR52B4Q8NGK2 314 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 FAM210AQ96ND0 272 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZNF275Q9NSD4 429 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 KLK11Q9UBX7 282 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ICAM5Q9UMF0 924 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 POMT1Q9Y6A1 747 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 SCN5AQ14524 2016 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 UBE2L5PA0A1B0GUS4 154 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR5B21A6NL26 309 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 H3BP45 60 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 K7ESF4 209 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 SOX15O60248 233 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 UPK3AO75631 287 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 LY86O95711 162 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR13C7P0DN81 318 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 PTHLHP12272 177 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ACKR3P25106 362 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CTSSP25774 331 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 NDUFA6P56556 154 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 IGFBP7Q16270 282 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 SP6Q3SY56 376 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 SLC35B4Q969S0 331 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 MED30Q96HR3 178 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 RSRP1Q9BUV0 290 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR2J1Q9GZK6 312 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 PIGMQ9H3S5 423 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms