RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 FCGR3AP08637 254 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 LIPCP11150 499 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 EDN3P14138 238 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 HOXB1P14653 301 aaPredicted RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 ANOS1P23352 680 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 IL32P24001 234 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 PSMB6P28072 239 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 NTF4P34130 210 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 APLNRP35414 380 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 RBMXP38159 391 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 GLP1RP43220 463 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 NPY4RP50391 375 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 RBM11P57052 281 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 EIF5AP63241 154 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 ZNF92Q03936 586 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 HGFACQ04756 655 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 SRSF7Q16629 238 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP28-206ENST00000538224 MPV17LQ2QL34 196 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 ZNF766Q5HY98 468 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 NKAPLQ5M9Q1 402 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 TMEM211Q6ICI0 200 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 RPUSD3Q6P087 351 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 IGF2-ASQ6U949 168 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 MOB3CQ70IA8 216 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 KCTD9Q7L273 389 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 NUFIP2Q7Z417 695 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 RNF144BQ7Z419 303 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 C1QL2Q7Z5L3 287 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 TMEM200AQ86VY9 491 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 SGPP2Q8IWX5 399 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 TUSC5Q8IXB3 177 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 PDZD9Q8IXQ8 264 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 MKXQ8IYA7 352 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 LINC00469Q8N7U9 141 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 ADAD2Q8NCV1 583 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 Q8NFD4 153 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 OR10K1Q8NGX5 313 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 OR13G1Q8NGZ3 307 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 FNDC9Q8TBE3 224 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 LRRC20Q8TCA0 184 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 PPP1R1CQ8WVI7 109 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 HIST1H2AAQ96QV6 131 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 ST6GALNAC5Q9BVH7 336 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 REPIN1Q9BWE0 567 aaKnown RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 C5orf66Q9H5L9 145 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 LDAHQ9H6V9 325 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 CALHM2Q9HA72 323 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 SPACA1Q9HBV2 294 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 CHMP1AQ9HD42 196 aaPredicted RBP5.75□□□□□ -1.49
USP28-206ENST00000538224 C12orf4Q9NQ89 552 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 ZFP57Q9NU63 452 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 IL17BQ9UHF5 180 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 MPC1Q9Y5U8 109 aa5.75□□□□□ -1.49
USP28-206ENST00000538224 TRBV6-7A0A0A0MS04 114 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 C5orf49A4QMS7 147 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SLC22A20A6NK97 555 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR5B21A6NL26 309 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 ANKRD30BLA7E2S9 258 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 POM121CA8CG34 1229 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CDRT15L2A8MXV6 281 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 I3L521 148 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CCSO14618 274 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SHOXO15266 292 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SPRY1O43609 319 aaPredicted RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 SS18L1O75177 396 aaPredicted RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 SLC34A2O95436 690 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CFDP00746 253 aaPredicted RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 IFNA2P01563 188 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 IFNA21P01568 189 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CELA3AP09093 270 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR5H8P0DN80 308 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CD79AP11912 226 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 FUT3P21217 361 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SERPINF1P36955 418 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 RFC3P40938 356 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 P2RX3P56373 397 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SRPXP78539 464 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 TGFBR3Q03167 851 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SPEM2Q0P670 501 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 BAMBIQ13145 260 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CLN3Q13286 438 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 MRPL49Q13405 166 aaKnown RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 CEACAM21Q3KPI0 293 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 TOR2AQ5JU69 321 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 AADACL3Q5VUY0 350 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 FBXW9Q5XUX1 488 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 ELP2Q6IA86 826 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CLEC18BQ6UXF7 455 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 Q6ZS49 121 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 P4HA3Q7Z4N8 544 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 C6orf201Q7Z4U5 140 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 DTX1Q86Y01 620 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 FAM185AQ8N0U4 392 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 ZNF611Q8N823 705 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 CCDC71LQ8N9Z2 235 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR56B2PQ8NGI1 322 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR5A2Q8NGI9 324 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR5M9Q8NGP3 310 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR1K1Q8NGR3 316 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 OR51F2Q8NH61 342 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms