RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SPACA5Q96QH8 159 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 DCTN5Q9BTE1 182 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 DNTTIP1Q9H147 329 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 CNTD2Q9H8S5 307 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 TRIM36Q9NQ86 728 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 INPP5EQ9NRR6 644 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 FKBP14Q9NWM8 211 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 PCDHGB5Q9Y5G0 923 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 PCDHGB1Q9Y5G3 927 aa6.91□□□□□ -1.3
SPARC-208ENST00000538026 A0A0A6YYJ9 748 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 TRAV40A0A0B4J280 105 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 TMEM82A0PJX8 343 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 H0YAE9 185 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 OGG1O15527 345 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 ZNF737O75373 536 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 INMTO95050 263 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 CALCBP10092 127 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 DCKP27707 260 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
SPARC-208ENST00000538026 PRDX2P32119 198 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 GABRA2P47869 451 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 RPS11P62280 158 aaKnown RBP eCLIP6.9□□□□□ -1.3
SPARC-208ENST00000538026 SLC34A1Q06495 639 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 IL24Q13007 206 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 DEFB112Q30KQ8 113 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 KLHL22Q53GT1 634 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 ARMCX4Q5H9R4 360 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 CD276Q5ZPR3 534 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 BTNL3Q6UXE8 466 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 UTS2BQ765I0 119 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 SLC36A1Q7Z2H8 476 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 FAM220AQ7Z4H9 259 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 EGFL6Q8IUX8 553 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 PNKDQ8N490 385 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 CCDC54Q8NEL0 328 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 ZNF555Q8NEP9 628 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 OR51A2Q8NGJ7 313 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 SLAMF9Q96A28 289 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 TMIGD2Q96BF3 282 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 C10orf35Q96D05 121 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 ORAI1Q96D31 301 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 NKX3-1Q99801 234 aaPredicted RBP6.9□□□□□ -1.3
SPARC-208ENST00000538026 PCGF1Q9BSM1 259 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 MRI1Q9BV20 369 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 PKIBQ9C010 78 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 DCLRE1BQ9H816 532 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 C19orf12Q9NSK7 152 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 PAK1IP1Q9NWT1 392 aaPredicted RBP6.9□□□□□ -1.3
SPARC-208ENST00000538026 RASL12Q9NYN1 266 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 DNAJB11Q9UBS4 358 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 SLC25A10Q9UBX3 287 aaPredicted RBP6.9□□□□□ -1.3
SPARC-208ENST00000538026 PSORS1C1Q9UIG5 152 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
SPARC-208ENST00000538026 DIMT1Q9UNQ2 313 aaKnown RBP6.9□□□□□ -1.3
SPARC-208ENST00000538026 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 SNTNA6NMZ2 147 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 RNASEK-C17orf49H0YIS7 233 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 NDUFB3O43676 98 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ANGPTL7O43827 346 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 TOX4O94842 621 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ECDO95905 644 aaPredicted RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 MT-ND2P03891 347 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 LIPFP07098 398 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 BCL3P20749 454 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 AZGP1P25311 298 aaKnown RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 DUSP1P28562 367 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 AQP4P55087 323 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 DLX6P56179 175 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 CAV3P56539 151 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ZP1P60852 638 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ACTA2P62736 377 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 UBA52P62987 128 aaKnown RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 ACTG2P63267 376 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 IL13RA1P78552 427 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ST3GAL4Q11206 333 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 KLRD1Q13241 179 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 IL18R1Q13478 541 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 CDK5R1Q15078 307 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 DMKNQ6E0U4 476 aaPredicted RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 C17orf107Q6ZR85 190 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 TCF23Q7RTU1 214 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 VMO1Q7Z5L0 202 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 PDZD9Q8IXQ8 264 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 BPIFB2Q8N4F0 458 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 PARP16Q8N5Y8 322 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ZNF676Q8N7Q3 588 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ZFP41Q8N8Y5 198 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 PNLDC1Q8NA58 520 aaKnown RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 DNAAF1Q8NEP3 725 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 OR52N4Q8NGI2 321 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 OR13C5Q8NGS8 318 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 ZNF418Q8TF45 676 aaPredicted RBP6.89□□□□□ -1.31
SPARC-208ENST00000538026 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 C17orf50Q8WW18 174 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 GATAD2BQ8WXI9 593 aa6.89□□□□□ -1.31
SPARC-208ENST00000538026 PP6455Q8WZ26 134 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms