RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 MFSD4AQ8N468 514 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 ACOT12Q8WYK0 555 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 CPNE2Q96FN4 548 aaPredicted RBP13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 PKIBQ9C010 78 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 LIME1Q9H400 295 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 GCM1Q9NP62 436 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 IL19Q9UHD0 177 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 hCG_1807616A0A1W2PRN6 198 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 J3QRK9 145 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 CDC14BO60729 498 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 CRTAPO75718 401 aaPredicted RBP13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 KDM4BO94953 1096 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 MPIG6BO95866 241 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 EGR1P18146 543 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 TNFSF4P23510 183 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 SRP9P49458 86 aaKnown RBP13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 SNU13P55769 128 aaKnown RBP13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 RSU1Q15404 277 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 CMTM4Q8IZR5 234 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 PXT1Q8NFP0 134 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 NICN1Q9BSH3 213 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 METTL9Q9H1A3 318 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 WDR13Q9H1Z4 485 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 MS4A5Q9H3V2 200 aa13.21□□□□□ -0.29
SFSWAP-206ENST00000537582 A0A0A6YYD4 124 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 TNFSF8P32971 234 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 PPOXP50336 477 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 PDCD1Q15116 288 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 PIGYQ3MUY2 71 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM201AQ5SY85 155 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 DCDC5Q6ZRR9 648 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 CELF2-AS1Q8N7Q2 184 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 ZSCAN4Q8NAM6 433 aaPredicted RBP13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 C19orf18Q8NEA5 215 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 COX4I2Q96KJ9 171 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 DIRC2Q96SL1 478 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 S100A13Q99584 98 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 SAP30LQ9HAJ7 183 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 DECR2Q9NUI1 292 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 ETV7Q9Y603 341 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 CHD3Q12873 2000 aaKnown RBP13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 CELSR2Q9HCU4 2923 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 LYNX1G3V0Z9 82 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 PFDN1O60925 122 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 NDUFS7O75251 213 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 ZNF205O95201 554 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 CYB5R3P00387 301 aaPredicted RBP13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 TFF1P04155 84 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 PGA5P0DJD9 388 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 LYNX1P0DP58 116 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 BMP4P12644 408 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 MGMTP16455 207 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 GATA4P43694 442 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 MZT1Q08AG7 82 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 RGS21Q2M5E4 152 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 MOGAT2Q3SYC2 334 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM209AQ5JX71 171 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 UBE2NLQ5JXB2 153 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 MKXQ8IYA7 352 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 SAXO1Q8IYX7 474 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 BOLLQ8N9W6 283 aaKnown RBP13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 OR4M1Q8NGD0 313 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 LRRC29Q8WV35 223 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 CEP19Q96LK0 163 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 NRIP2Q9BQI9 281 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 SELENOIQ9C0D9 397 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 LPAR5Q9H1C0 372 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
SFSWAP-206ENST00000537582 FASNP49327 2511 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 TACC2O95359 2948 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 hCG_2014768A0A024R1R8 64 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 UBBP0CG47 229 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 DUSP1P28562 367 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 ART1P52961 327 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 ERVK11-1P61568 191 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 CNIH2Q6PI25 160 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 POC1AQ8NBT0 407 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 IGFBPL1Q8WX77 278 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 TMEM59Q9BXS4 323 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 IL36GQ9NZH8 169 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 FBLN5Q9UBX5 448 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 POLDIP2Q9Y2S7 368 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 PEX16Q9Y5Y5 336 aa13.19□□□□□ -0.3
SFSWAP-206ENST00000537582 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 CYB5AP00167 134 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms