RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 ADGRL4Q9HBW9 690 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 HES4Q9HCC6 221 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 PAPOLBQ9NRJ5 636 aaKnown RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 USE1Q9NZ43 259 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 OR14J1Q9UGF5 321 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 MRM2Q9UI43 246 aaKnown RBP6.85□□□□□ -1.31
USP28-203ENST00000537490 OR52A1Q9UKL2 312 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 GTF2A1LQ9UNN4 478 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 SLC22A13Q9Y226 551 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 TMEM14AQ9Y6G1 99 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 R4GMQ9 66 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 TGP01266 2768 aa6.85□□□□□ -1.31
USP28-203ENST00000537490 A0A1W2PPH5 198 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 C17orf98A8MV24 154 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 F8VVB4 439 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 F8VWA3 439 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 DLGAP1O14490 977 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 MITFO75030 526 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 PRB2P02812 416 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 OPN1MWP04001 364 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 OPN1MW2P0DN77 364 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 OPN1MW3P0DN78 364 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 VSIG10L2P0DP72 767 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 HOXB6P17509 224 aaKnown RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 MPZP25189 248 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 EPHA2P29317 976 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 LGALS4P56470 323 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 ERVK11-1P61568 191 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 ESRRGP62508 458 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 COL10A1Q03692 680 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 HABP2Q14520 560 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 PLA1AQ53H76 456 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 BCL2L15Q5TBC7 163 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 C11orf88Q6PI97 169 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 CCBE1Q6UXH8 406 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 SSX6Q7RTT6 188 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 TCEANCQ8N8B7 351 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 TRMT10AQ8TBZ6 339 aaKnown RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 DNAJC9Q8WXX5 260 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 SLC7A6OSQ96CW6 309 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 NRBF2Q96F24 287 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 NKX3-1Q99801 234 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 ZNF702PQ9H963 129 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 RAB18Q9NP72 206 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 SERTAD4Q9NUC0 356 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 H2AFY2Q9P0M6 372 aaPredicted RBP6.84□□□□□ -1.31
USP28-203ENST00000537490 POMPQ9Y244 141 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 POLDIP2Q9Y2S7 368 aa6.84□□□□□ -1.31
USP28-203ENST00000537490 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 IGKV1-27A0A075B6S5 117 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 hCG_1809904A0A1W2PP81 198 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 A0A1W2PPE2 198 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 FAM230AA0A1W2PPH8 454 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 A0A1W2PR64 198 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 A0A1W2PRV1 198 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 A6NDX4 124 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 ZAR1LA6NP61 321 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 VGLL3A8MV65 326 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 ZNF670-ZNF695F2Z2N8 137 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 H3BSH0 61 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 K7N7A8 449 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 GYG2O15488 501 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 ZNF737O75373 536 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 INMTO95050 263 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 RPP14O95059 124 aaKnown RBP6.83□□□□□ -1.32
USP28-203ENST00000537490 ARG1P05089 322 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 CD28P10747 220 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 CCL1P22362 96 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 ACTR3P61158 418 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 IL24Q13007 206 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 UBE2V2Q15819 145 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 FAM189A2Q15884 450 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 ODF4Q2M2E3 257 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
USP28-203ENST00000537490 SLX4IPQ5VYV7 408 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 NXNL2Q5VZ03 156 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 C12orf73Q69YU5 71 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 Q8N2B8 174 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 TMEM163Q8TC26 289 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 IL4I1Q96RQ9 567 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 MNTQ99583 582 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 TBX5Q99593 518 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 PKIBQ9C010 78 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 NPFFR1Q9GZQ6 430 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 MOB1AQ9H8S9 216 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 CLN6Q9NWW5 311 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 MTCH1Q9NZJ7 389 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 TCF19Q9Y242 345 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 SNX5Q9Y5X3 404 aa6.83□□□□□ -1.32
USP28-203ENST00000537490 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 DHRS7CA6NNS2 312 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 ODF3BA8MYP8 253 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 CHRM2P08172 466 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 ZNF728P0DKX0 622 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 JUNBP17275 347 aaPredicted RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 EDDM3BP56851 147 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 SSX2Q16385 188 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms