RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PDCD1Q15116 288 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 LRRC10Q5BKY1 277 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 PLCXD3Q63HM9 321 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 OLFML2AQ68BL7 652 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 KCTD8Q6ZWB6 473 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 COMMD2Q86X83 199 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 SYS1Q8N2H4 156 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 OR2G2Q8NGZ5 317 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 PP6455Q8WZ26 134 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 LGALS12Q96DT0 336 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 CNBD2Q96M20 576 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 GAFA1Q96PS6 74 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 TBX5Q99593 518 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 NRIP2Q9BQI9 281 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 PCGF1Q9BSM1 259 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 JAM3Q9BX67 310 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 CHST5Q9GZS9 411 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 NOX4Q9NPH5 578 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 DNAJB11Q9UBS4 358 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 MYRFQ9Y2G1 1151 aa10.24□□□□□ -0.77
PRKDC-207ENST00000536483 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 A0A1B0GVI7 797 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 A0A1B0GW55 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DAPL1A0PJW8 107 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ANKRD61A6NGH8 418 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 SYT7O43581 403 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 TOX4O94842 621 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 SFTPBP07988 381 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 MELTFP08582 738 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DBTP11182 482 aaKnown RBP10.23□□□□□ -0.77
PRKDC-207ENST00000536483 GLRA1P23415 457 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ACTA2P62736 377 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ACTG2P63267 376 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF91Q05481 1191 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 MRPL28Q13084 256 aaKnown RBP10.23□□□□□ -0.77
PRKDC-207ENST00000536483 IL18R1Q13478 541 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 GALEQ14376 348 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DGUOKQ16854 277 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 HAGHLQ6PII5 290 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-207ENST00000536483 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ACP7Q6ZNF0 438 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 UTS2BQ765I0 119 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 FAM220AQ7Z4H9 259 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DNAAF1Q8NEP3 725 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 HAVCR2Q8TDQ0 301 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 MRPL48Q96GC5 212 aaKnown RBP10.23□□□□□ -0.77
PRKDC-207ENST00000536483 CITED1Q99966 193 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 ACOXLQ9NUZ1 547 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 FRRS1LQ9P0K9 344 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 GTF2A1LQ9UNN4 478 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 POLDIP2Q9Y2S7 368 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 MAB21L2Q9Y586 359 aa10.23□□□□□ -0.77
PRKDC-207ENST00000536483 A0A087WXM4 84 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 A0A0G2JK05 382 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 CLPSL1A2RUU4 121 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 NKX6-3A6NJ46 265 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 OR4C45A6NMZ5 311 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 GATBO75879 557 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 ALX3O95076 343 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 NDUFA7O95182 113 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 FADS2O95864 444 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 HAAOP46952 286 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 FUT6P51993 359 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 OR12D2P58182 307 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 NANOS3P60323 173 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 KRTAP10-3P60369 221 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 ADARB1P78563 741 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 UBE2V2Q15819 145 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 TP53I3Q53FA7 332 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 METTL11BQ5VVY1 283 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 FGFRL1Q8N441 504 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 NPRL2Q8WTW4 380 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 APH1BQ8WW43 257 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 ST8SIA4Q92187 359 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 DGCR14Q96DF8 476 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 PELI1Q96FA3 418 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 GPR173Q9NS66 373 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 SLC25A10Q9UBX3 287 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 GNG8Q9UK08 70 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 SLC7A11Q9UPY5 501 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 RPL36Q9Y3U8 105 aaKnown RBP10.22□□□□□ -0.77
PRKDC-207ENST00000536483 HSPE1-MOB4S4R3N1 261 aa10.22□□□□□ -0.77
PRKDC-207ENST00000536483 TRBV23-1A0A0A0MS06 115 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 IGHV1-69DA0A0B4J2H0 117 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 TRIM64CA6NLI5 447 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms