RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 MRPS18AQ9NVS2 196 aaKnown RBP11.73□□□□□ -0.53
UBE3B-206ENST00000536398 MTCH1Q9NZJ7 389 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 A0A1W2PRD5 423 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 A0A1W2PRF3 423 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 A0A1W2PRM7 423 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 GPR37O15354 613 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-206ENST00000536398 GATBO75879 557 aaKnown RBP11.72□□□□□ -0.53
UBE3B-206ENST00000536398 FADS2O95864 444 aaKnown RBP11.72□□□□□ -0.53
UBE3B-206ENST00000536398 ISG15P05161 165 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 CCR9P51686 369 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 FUT6P51993 359 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 CAPZA1P52907 286 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 CAV3P56539 151 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 IL24Q13007 206 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 KLRD1Q13241 179 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 PDCD1Q15116 288 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 SMIM21Q3B7S5 101 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF691Q5VV52 312 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 PNKDQ8N490 385 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 CCDC54Q8NEL0 328 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 CYGBQ8WWM9 190 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 GATAD2BQ8WXI9 593 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 PKIBQ9C010 78 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 OR14J1Q9UGF5 321 aa11.72□□□□□ -0.53
UBE3B-206ENST00000536398 RPL36Q9Y3U8 105 aaKnown RBP11.72□□□□□ -0.53
UBE3B-206ENST00000536398 A0A0U1RQK1 487 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 SERPINA3P01011 423 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 LIMS3P0CW19 117 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 LIMS4P0CW20 117 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 CALCBP10092 127 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 ATF1P18846 271 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 CFPP27918 469 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 NPBWR2P48146 333 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-206ENST00000536398 GTF2A1P52655 376 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-206ENST00000536398 BPIFB3P59826 476 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 ACTA2P62736 377 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 ACTG2P63267 376 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 Q6YL49 198 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 SYS1Q8N2H4 156 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF676Q8N7Q3 588 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 OR13C3Q8NGS6 347 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 C10orf35Q96D05 121 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 BORCS8Q96FH0 119 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 SPACA5Q96QH8 159 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 IL36RNQ9UBH0 155 aa11.71□□□□□ -0.53
UBE3B-206ENST00000536398 A0A1W2PQ09 198 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 CLDN34H7C241 214 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 ZFPL1O95159 310 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 RNASE1P07998 156 aaKnown RBP11.7□□□□□ -0.54
UBE3B-206ENST00000536398 MELTFP08582 738 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 ZNF20P17024 532 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 AZGP1P25311 298 aaKnown RBP11.7□□□□□ -0.54
UBE3B-206ENST00000536398 ETV1P50549 477 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 ERVFRD-1P60508 538 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 ADARB1P78563 741 aaKnown RBP11.7□□□□□ -0.54
UBE3B-206ENST00000536398 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 AWAT1Q58HT5 328 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 XAF1Q6GPH4 301 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 SLC25A28Q96A46 364 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 RFT1Q96AA3 541 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 CEP19Q96LK0 163 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 PDCD1LG2Q9BQ51 273 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-206ENST00000536398 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 HHLA2Q9UM44 414 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
UBE3B-206ENST00000536398 MEX3AA1L020 520 aaKnown RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 KNG1P01042 644 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 GNAO1P09471 354 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 HKR1P10072 659 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 BCL3P20749 454 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 POU3F4P49335 361 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 RBP2P50120 134 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 MTCP1P56278 107 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 COL10A1Q03692 680 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 CNN3Q15417 329 aaKnown RBP11.69□□□□□ -0.54
UBE3B-206ENST00000536398 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 TMEM200BQ69YZ2 307 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 HCP5Q6MZN7 132 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 CRIP3Q6Q6R5 217 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 EGFL6Q8IUX8 553 aa11.69□□□□□ -0.54
UBE3B-206ENST00000536398 CMTM4Q8IZR5 234 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms