RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 OR2C1O95371 312 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 VSIG8P0DPA2 414 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF93P35789 620 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-203ENST00000535977 EIF5AL1Q6IS14 154 aaKnown RBP15.76■□□□□ 0.11
RAB40C-203ENST00000535977 TRAPPC6BQ86SZ2 158 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 CHST4Q8NCG5 386 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 S100A13Q99584 98 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 MMP24Q9Y5R2 645 aa15.76■□□□□ 0.11
RAB40C-203ENST00000535977 TMEM14DPA8MWL7 114 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 CD300LFQ8TDQ1 290 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 NKD1Q969G9 470 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 STARD10Q9Y365 291 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 WDFY4Q6ZS81 3184 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 EFSO43281 561 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 GUCA1AP43080 201 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-203ENST00000535977 UNC119Q13432 240 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 OPN5Q6U736 354 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 HIST3H2BBQ8N257 126 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 OR51E1Q8TCB6 317 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 AQP10Q96PS8 301 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 CDC6Q99741 560 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 ATG101Q9BSB4 218 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 FLVCR1Q9Y5Y0 555 aa15.75■□□□□ 0.11
RAB40C-203ENST00000535977 DUS4LO95620 317 aaKnown RBP15.74■□□□□ 0.11
RAB40C-203ENST00000535977 SFTPBP07988 381 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 CCL1P22362 96 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 CTSSP25774 331 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 EXT1Q16394 746 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 TMEM176BQ3YBM2 270 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-203ENST00000535977 DOK3Q7L591 496 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 KCNG3Q8TAE7 436 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 GALNT14Q96FL9 552 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 CHCHD2Q9Y6H1 151 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-203ENST00000535977 A0A1W2PNR3 127 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 GSTP1P09211 210 aaKnown RBP15.74■□□□□ 0.11
RAB40C-203ENST00000535977 QDPRP09417 244 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 CX3CR1P49238 355 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 GUK1Q16774 197 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 PRSS54Q6PEW0 395 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF610Q8N9Z0 462 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 SEMA6DQ8NFY4 1073 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 OR13C9Q8NGT0 318 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 MKRN2OSH3BPM6 223 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 RPL36A-HNRNPH2H7BZ11 118 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF674Q2M3X9 581 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 LCN10Q6JVE6 187 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 LYPD6BQ8NI32 183 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 NTNG2Q96CW9 530 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 SCRT1Q9BWW7 348 aa15.74■□□□□ 0.11
RAB40C-203ENST00000535977 CACNA1EQ15878 2313 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 PPP1R2P9O14990 202 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BKO60814 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 STK17BO94768 372 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 TSPAN15O95858 294 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BJP06899 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BOP23527 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BBP33778 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 SNCAP37840 140 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 CEACAM6P40199 344 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BDP58876 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BCP62807 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 FOXK1P85037 733 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 CYCSP99999 105 aaKnown RBP15.73■□□□□ 0.11
RAB40C-203ENST00000535977 NHLH2Q02577 135 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 PCOLCEQ15113 449 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST2H2BEQ16778 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HLA-BQ31612 363 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-203ENST00000535977 OR51F2Q8NH61 342 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BHQ93079 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BNQ99877 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 HIST1H2BMQ99879 126 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 EIF5A2Q9GZV4 153 aaKnown RBP15.73■□□□□ 0.11
RAB40C-203ENST00000535977 PILRBQ9UKJ0 227 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF587BE7ETH6 402 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 ADAP1O75689 374 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 VAMP5O95183 116 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 IFNA6P05013 189 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 FABP4P15090 132 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF121P58317 390 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-203ENST00000535977 CD81P60033 236 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 ABHD12BQ7Z5M8 362 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-203ENST00000535977 BCO1Q9HAY6 547 aa15.73■□□□□ 0.11
RAB40C-203ENST00000535977 MYO15AQ9UKN7 3530 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 ASCC3Q8N3C0 2202 aaKnown RBP15.72■□□□□ 0.11
RAB40C-203ENST00000535977 OR5H15A6NDH6 313 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 OR5H1A6NKK0 313 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 MBP02144 154 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 RAB1AP62820 205 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 EIF5AP63241 154 aaKnown RBP15.72■□□□□ 0.11
RAB40C-203ENST00000535977 TNFRSF9Q07011 255 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 TRA2AQ13595 282 aaKnown RBP eCLIP15.72■□□□□ 0.11
RAB40C-203ENST00000535977 MIDNQ504T8 468 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 COMMD2Q86X83 199 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF101Q8IZC7 436 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 OR10AD1Q8NGE0 317 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 OR8B12Q8NGG6 310 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 ZNF700Q9H0M5 742 aa15.72■□□□□ 0.11
RAB40C-203ENST00000535977 METTL9Q9H1A3 318 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms