RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ERVK11-1P61568 191 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 RSU1Q15404 277 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 MPPED2Q15777 294 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 DGUOKQ16854 277 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 AWAT2Q6E213 333 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 MZT2AQ6P582 158 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 CRIP3Q6Q6R5 217 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 PRSS57Q6UWY2 283 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 ZCCHC24Q8N2G6 241 aaKnown RBP13.7□□□□□ -0.22
VAMP1-205ENST00000535927 DVL3Q92997 716 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-205ENST00000535927 TIMD4Q96H15 378 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 NRIP2Q9BQI9 281 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 RNF167Q9H6Y7 350 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 SMURF1Q9HCE7 757 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 TMEM106BQ9NUM4 274 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 GLS2Q9UI32 602 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 ETV7Q9Y603 341 aa13.7□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A10PA6NDY2 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A8PA6NJQ4 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A7PA6NKC0 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A22PA8MWA6 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A23PA8MXZ1 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 TMEM178BH3BS89 294 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 AKR7A2O43488 359 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 NCR1O76036 304 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 GTF2F2P13984 249 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 ARSBP15848 533 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 CDKN1AP38936 164 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 POU3F4P49335 361 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 ATP5J2P56134 94 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 MXD1Q05195 221 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 SMIM21Q3B7S5 101 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 PRAMEF6Q5VXH4 476 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 GLIPR1L1Q6UWM5 242 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 LINC00596Q86U02 117 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 DYNC2LI1Q8TCX1 351 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 RAB1CQ92928 201 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 SLC25A28Q96A46 364 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 FAM3DQ96BQ1 224 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 LURAP1Q96LR2 239 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 GFI1Q99684 422 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 DNTTIP1Q9H147 329 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 HES4Q9HCC6 221 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 UFSP2Q9NUQ7 469 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 ING4Q9UNL4 249 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 PLEKHA6Q9Y2H5 1048 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
VAMP1-205ENST00000535927 TRAV38-1A0A0B4J264 116 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 hCG_1807616A0A1W2PRN6 198 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 CLDN25C9JDP6 229 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 SCGNO76038 276 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 RAB6AP20340 208 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 GIFP27352 417 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 PTH2RP49190 550 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 PDLIM4P50479 330 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 SPCS2Q15005 226 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 DEFB113Q30KQ7 82 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 SPIN3Q5JUX0 258 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 OR4D6Q8NGJ1 314 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 OR51T1Q8NGJ9 327 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 LRRC29Q8WV35 223 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 CCL17Q92583 94 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 SPACA5Q96QH8 159 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 MTCH1Q9NZJ7 389 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 RAB22AQ9UL26 194 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 SPATA2Q9UM82 520 aa13.68□□□□□ -0.22
VAMP1-205ENST00000535927 HRNRQ86YZ3 2850 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-205ENST00000535927 A0A075B6Q4 140 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 PPIAL4EA0A075B759 164 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 RP2O75695 350 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 PPIAL4FP0DN26 164 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 GLRA1P23415 457 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 PMELP40967 661 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 OR3A4PP47883 348 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 OR10A3P58181 314 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 FGF12P61328 243 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
VAMP1-205ENST00000535927 MICBQ29980 383 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 DMRTC1Q5HYR2 192 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 IDNKQ5T6J7 187 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 TEX36Q5VZQ5 186 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 NR2C2APQ86WQ0 139 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 FAM58AQ8N1B3 248 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 MUC20Q8N307 709 aaPredicted RBP13.67□□□□□ -0.22
VAMP1-205ENST00000535927 NDNFQ8TB73 568 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 URM1Q9BTM9 101 aaKnown RBP13.67□□□□□ -0.22
VAMP1-205ENST00000535927 LIN7BQ9HAP6 207 aa13.67□□□□□ -0.22
VAMP1-205ENST00000535927 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms