RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CLDN6P56747 220 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 CLDN2P57739 230 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 UBE2KP61086 200 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 RPS21P63220 83 aaKnown RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 CDK3Q00526 305 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ZNF117Q03924 483 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 PNRC1Q12796 327 aaPredicted RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 EIF3IQ13347 325 aaKnown RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 FHL1Q13642 323 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 KIR2DS3Q14952 304 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 MIDNQ504T8 468 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 NCMAPQ5T1S8 102 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 TMEM268Q5VZI3 342 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 RPL7L1Q6DKI1 246 aaKnown RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 KLHL24Q6TFL4 600 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 DPPA3Q6W0C5 159 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 MRGPRGQ86SM5 289 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 BIVMQ86UB2 503 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 SGPP2Q8IWX5 399 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 C1orf87Q8N0U7 546 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 LINC01555Q8NAE3 123 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 POC1AQ8NBT0 407 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 OR5D14Q8NGL3 314 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 KCNG3Q8TAE7 436 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ADAMTS18Q8TE60 1221 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 ANKRD9Q96BM1 317 aaPredicted RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 NTNG2Q96CW9 530 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 RBMXL1Q96E39 390 aaKnown RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 TVP23CQ96ET8 276 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 PRR25Q96S07 402 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 METTL9Q9H1A3 318 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 KIR3DX1Q9H7L2 352 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 FKRPQ9H9S5 495 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 SERTAD4Q9NUC0 356 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 GSKIPQ9P0R6 139 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 APOBEC3BQ9UH17 382 aaKnown RBP5.77□□□□□ -1.49
USP28-202ENST00000535607 PITPNC1Q9UKF7 332 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 DAPP1Q9UN19 280 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 GPR132Q9UNW8 380 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 B3GALT5Q9Y2C3 310 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 TMED7Q9Y3B3 224 aa5.77□□□□□ -1.49
USP28-202ENST00000535607 IGKV1-8A0A0C4DH67 115 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 A0A1B0GV90 55 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 A0A1W2PPE3 182 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TMEM235A6NFC5 223 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR2W5A6NFC9 320 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TLCD2A6NGC4 264 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SERINC4A6NH21 518 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 A6NIZ1 184 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 C10orf142B7Z368 130 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 FAM157AC9JC47 383 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 RPL36A-HNRNPH2H7BZ11 118 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SMAD9O15198 467 aaKnown RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 CRTAPO75718 401 aaPredicted RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 PCCBP05166 539 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SFTPBP07988 381 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR5AC1P0C628 307 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR8U9P0C7N5 309 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 LIPCP11150 499 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SELLP14151 372 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 PTGER1P34995 402 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TAGLN2P37802 199 aaKnown RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 KIR3DL2P43630 455 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 P2RY1P47900 373 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 CCR5P51681 352 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 METAP1P53582 386 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 RAP1BP61224 184 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 GLO1Q04760 184 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 FHL2Q14192 279 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 ZNF266Q14584 549 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 IL13RA2Q14627 380 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 ZNF74Q16587 644 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 MEP1BQ16820 701 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TRMT12Q53H54 448 aaKnown RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 PYY3Q5JQD4 70 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 KIRREL2Q6UWL6 708 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 CLEC18BQ6UXF7 455 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 DPY19L4Q7Z388 723 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 SLC35E3Q7Z769 313 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 DPPA2Q7Z7J5 298 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 CATSPERDQ86XM0 798 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 HSD17B11Q8NBQ5 300 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 ADAD2Q8NCV1 583 aaKnown RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 ZNF248Q8NDW4 579 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR52E1Q8NGJ3 308 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR8U1Q8NH10 309 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 OR6X1Q8NH79 312 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 ZNF563Q8TA94 476 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 MARCH1Q8TCQ1 289 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 RRNAD1Q96FB5 475 aaKnown RBP5.76□□□□□ -1.49
USP28-202ENST00000535607 BTF3L4Q96K17 158 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 PIGQQ9BRB3 760 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 GINS3Q9BRX5 216 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 ARV1Q9H2C2 271 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TMEM242Q9NWH2 141 aa5.76□□□□□ -1.49
USP28-202ENST00000535607 TAS2R4Q9NYW5 299 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms