RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RPL11P62913 178 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 HIST1H1AQ02539 215 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 AKR1C1Q04828 323 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 CTBP1Q13363 440 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 PDE7AQ13946 482 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MMDQ15546 238 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SMN1Q16637 294 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 HIST3H3Q16695 136 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SPANXN3Q5MJ09 141 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 UTF1Q5T230 341 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 TPRG1Q6ZUI0 275 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MEPCEQ7L2J0 689 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 PARS2Q7L3T8 475 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 TMPRSS11BQ86T26 416 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 YAF2Q8IY57 180 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 TCEANCQ8N8B7 351 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 LINC00482Q8N8I6 264 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 ZNF439Q8NDP4 499 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 OR5AN1Q8NGI8 311 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 OR5A1Q8NGJ0 315 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 OR10G4Q8NGN3 311 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 OR6K2Q8NGY2 324 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 HAVCR2Q8TDQ0 301 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 ZNF480Q8WV37 535 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 HOXB13Q92826 284 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 RAB8BQ92930 207 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 APOBEC3DQ96AK3 386 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 APH1AQ96BI3 265 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 ZMYND19Q96E35 227 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 IMP4Q96G21 291 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 DNAJC30Q96LL9 226 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 OR6C1Q96RD1 312 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SEPHS2Q99611 448 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MICU1Q9BPX6 476 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MACROD1Q9BQ69 325 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 PYGO2Q9BRQ0 406 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SLC25A33Q9BSK2 321 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 DOHHQ9BU89 302 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 VAMP8Q9BV40 100 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 RBM24Q9BX46 236 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 RSPO3Q9BXY4 272 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 NMNAT2Q9BZQ4 307 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 NXF5Q9H1B4 397 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SLC25A18Q9H1K4 315 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SLC35B3Q9H1N7 401 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 NELFAQ9H3P2 528 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SLC52A3Q9NQ40 469 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 MEPEQ9NQ76 525 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 PRSS16Q9NQE7 514 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 SDR39U1Q9NRG7 319 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 LANCL2Q9NS86 450 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 FLRT1Q9NZU1 646 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 FUT9Q9Y231 359 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 HS3ST2Q9Y278 367 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 RNF115Q9Y4L5 304 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 ETV7Q9Y603 341 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 CFAP20Q9Y6A4 193 aaKnown RBP4.55□□□□□ -1.68
SNHG1-201ENST00000535076 PKD1L3Q7Z443 1732 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 TOGARAM1Q9Y4F4 1720 aa4.55□□□□□ -1.68
SNHG1-201ENST00000535076 ZNF646O15015 1829 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 FRMPD3Q5JV73 1810 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 IGHV2-26A0A0B4J1V2 119 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 CENPVL1A0A0U1RR11 272 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 A0A1W2PPV9 198 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 GXYLT2A0PJZ3 443 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 F5H5T6 163 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 GABARAPH6UMI1 98 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 HSD17B6O14756 317 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 ZNF207O43670 478 aaKnown RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 PLPP2O43688 288 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 CD5LO43866 347 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 NDUFB6O95139 128 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 NUDT3O95989 172 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 SOD1P00441 154 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 CGAP01215 116 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 MAS1P04201 325 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 EDN1P05305 212 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 WNT2P09544 360 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 RAB40ALP0C0E4 278 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 EBLN1P0CF75 366 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 ALOX5APP20292 161 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 TNFRSF1BP20333 461 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 RPS4Y1P22090 263 aaKnown RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 AOAHP28039 575 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 ARL2P36404 184 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 AVPR1AP37288 418 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 CDKN2BP42772 138 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 KIR2DS4P43632 304 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 PTH2RP49190 550 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 CSRP3P50461 194 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 DAPP51397 102 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 DUSP3P51452 185 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 HNRNPA3P51991 378 aaKnown RBP4.54□□□□□ -1.68
SNHG1-201ENST00000535076 PAX9P55771 341 aa4.54□□□□□ -1.68
SNHG1-201ENST00000535076 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms